RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	UPK3B	Q9BT76	320 aa		2.05	□□□□□ -2.08
RPAP3-205	ENST00000548211	COMMD5	Q9GZQ3	224 aa		2.05	□□□□□ -2.08
RPAP3-205	ENST00000548211	EIF5A2	Q9GZV4	153 aa	Known RBP	2.05	□□□□□ -2.08
RPAP3-205	ENST00000548211	BANF2	Q9H503	90 aa		2.05	□□□□□ -2.08
RPAP3-205	ENST00000548211	LINC00588	Q9Y4M8	146 aa		2.05	□□□□□ -2.08
RPAP3-205	ENST00000548211	IGHV3OR16-8	A0A075B7F1	116 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	IGHV3-74	A0A0B4J1X5	117 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	TRAV3	A0A0B4J244	114 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	PLAC8L1	A1L4L8	177 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF705F	A8MVS1	300 aa	Predicted RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	KRBOX1	C9JBD0	128 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211		K7EP13	123 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	PDE6D	O43924	150 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF705D	P0CH99	300 aa	Predicted RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF705B	P0CI00	300 aa	Predicted RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	SCGB1A1	P11684	91 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	ATP5G3	P48201	142 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	NMU	P48645	174 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	RAB2A	P61019	212 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	FABP5	Q01469	135 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	FLI1	Q01543	452 aa	Predicted RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	ERCC8	Q13216	396 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	TMEM183B	Q1AE95	376 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	RRN3P1	Q2M238	152 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	RPL22L1	Q6P5R6	122 aa	Known RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	NEGR1	Q7Z3B1	354 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	C6orf201	Q7Z4U5	140 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	TMEM183A	Q8IXX5	376 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	DEFB107A	Q8IZN7	70 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	GDPD1	Q8N9F7	314 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	OR4C16	Q8NGL9	310 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	TSC22D3	Q99576	134 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	GINS4	Q9BRT9	223 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	MIXL1	Q9H2W2	232 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	RBM12B-AS1	Q9P1G2	102 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	PKIG	Q9Y2B9	76 aa		2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211	YTHDF2	Q9Y5A9	579 aa	Known RBP	2.04	□□□□□ -2.08
RPAP3-205	ENST00000548211		A0A087WTM6	91 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	IGHV3-49	A0A0A0MS15	119 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	KNCN	A6PVL3	124 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211		B4DEV8	164 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211		G3V2T6	193 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211		J3QRE1	110 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211		M0R129	80 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	BET1	O15155	118 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	GYG2	O15488	501 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	GNG7	O60262	68 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	PFDN1	O60925	122 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	CRYGD	P07320	174 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	CTSG	P08311	255 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	NBEAP1	P0C6P0	100 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF688	P0C7X2	276 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	ESD	P10768	282 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	NPPC	P23582	126 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	DAP	P51397	102 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	MP68	P56378	58 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	PMAIP1	Q13794	54 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	PSMG4	Q5JS54	123 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	TMEM69	Q5SWH9	247 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	LPCAT3	Q6P1A2	487 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	CAMK2N1	Q7Z7J9	78 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	PRNT	Q86SH4	94 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	OR10G4	Q8NGN3	311 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	OR4X1	Q8NH49	305 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	LSM10	Q969L4	123 aa	Known RBP	2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	GNPNAT1	Q96EK6	184 aa	Predicted RBP	2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	KCNS1	Q96KK3	526 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	MARVELD1	Q9BSK0	173 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	GNB1L	Q9BYB4	327 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	SAMD10	Q9BYL1	202 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF586	Q9NXT0	402 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	BET1L	Q9NYM9	111 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	GSKIP	Q9P0R6	139 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	SS18L2	Q9UHA2	77 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	RSL24D1	Q9UHA3	163 aa	Known RBP	2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	AK3	Q9UIJ7	227 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	MRPS16	Q9Y3D3	137 aa	Known RBP	2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	HSPB11	Q9Y547	144 aa		2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.03	□□□□□ -2.08
RPAP3-205	ENST00000548211	TRBV6-7	A0A0A0MS04	114 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	TRAV8-1	A0A0A6YYK1	113 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	IGLC7	A0M8Q6	106 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	IRGM	A1A4Y4	181 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	EFCAB10	A6NFE3	127 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211		E7EUB6	86 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211		H3BMM0	161 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211		H3BNG1	76 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	HMGB3	O15347	200 aa	Known RBP	2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	RGS5	O15539	181 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	GSTZ1	O43708	216 aa	Predicted RBP	2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	SCO1	O75880	301 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	MT-CO2	P00403	227 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	PPBP	P02775	128 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	TRAPPC2	P0DI81	140 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	TRAPPC2B	P0DI82	140 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	DEFB130B	P0DP73	79 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	DEFB130A	P0DP74	79 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	HLA-DRB4	P13762	266 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	CRISP2	P16562	243 aa		2.02	□□□□□ -2.09
RPAP3-205	ENST00000548211	ORM2	P19652	201 aa		2.02	□□□□□ -2.09

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms