RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 SEC11BP0C7V7 166 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 UBE2L3P68036 154 aaKnown RBP8.69□□□□□ -1.02
CCDC59-202ENST00000547758 GAGE1Q13065 139 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 GAGE4Q13068 117 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 GAGE5Q13069 117 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
CCDC59-202ENST00000547758 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
CCDC59-202ENST00000547758 S100A10P60903 97 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 ZNF506Q5JVG8 444 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 CYB561D1Q8N8Q1 229 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 THAP6Q8TBB0 222 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 C2orf50Q96LR7 162 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 HYLS1Q96M11 299 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 TREM1Q9NP99 234 aa8.68□□□□□ -1.02
CCDC59-202ENST00000547758 S100A5P33763 92 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 BTCP35070 178 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 ATRAIDQ6UW56 229 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 NIT1Q86X76 327 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 C9orf85Q96MD7 179 aa8.67□□□□□ -1.02
CCDC59-202ENST00000547758 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
CCDC59-202ENST00000547758 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
CCDC59-202ENST00000547758 CMTM2Q8TAZ6 248 aa8.66□□□□□ -1.02
CCDC59-202ENST00000547758 PTH2Q96A98 100 aa8.66□□□□□ -1.02
CCDC59-202ENST00000547758 KCNIP2Q9NS61 270 aa8.66□□□□□ -1.02
CCDC59-202ENST00000547758 RAB32Q13637 225 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 OR10G9Q8NGN4 311 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 NMES1Q9C002 83 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 PARLQ9H300 379 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 Q9UF83 564 aa8.65□□□□□ -1.02
CCDC59-202ENST00000547758 A0A0D9SG52 128 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 PGPA6NDG6 321 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 CENPXA8MT69 81 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
CCDC59-202ENST00000547758 ELOBQ15370 118 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 KHDC3LQ587J8 217 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 FFAR4Q5NUL3 377 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 OR2T35Q8NGX2 323 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 CHCHD7Q9BUK0 85 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 SAMD10Q9BYL1 202 aa8.64□□□□□ -1.03
CCDC59-202ENST00000547758 A0A087WX48 190 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 RNASE3P12724 160 aaKnown RBP8.63□□□□□ -1.03
CCDC59-202ENST00000547758 NHLH2Q02577 135 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 Q0VG73 95 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 CNPY1Q3B7I2 92 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
CCDC59-202ENST00000547758 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 C1orf43Q9BWL3 253 aa8.63□□□□□ -1.03
CCDC59-202ENST00000547758 A8MWV9 139 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 USP17L23D6RBM5 183 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 PANO1I0J062 215 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 ZNF80P51504 273 aaPredicted RBP8.62□□□□□ -1.03
CCDC59-202ENST00000547758 TAS2R45P59539 299 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 IL15RAQ13261 267 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 KCNIP4Q6PIL6 250 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 ARL6IP6Q8N6S5 226 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 NDFIP1Q9BT67 221 aa8.62□□□□□ -1.03
CCDC59-202ENST00000547758 WDR61Q9GZS3 305 aaKnown RBP8.62□□□□□ -1.03
CCDC59-202ENST00000547758 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 TAAR5O14804 337 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 GNG5P63218 68 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 HSD17B11Q8NBQ5 300 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 ZC2HC1AQ96GY0 325 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 SEC22CQ9BRL7 303 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 MBD2Q9UBB5 411 aa8.61□□□□□ -1.03
CCDC59-202ENST00000547758 PRSS1P07477 247 aa8.6□□□□□ -1.03
CCDC59-202ENST00000547758 LGALSLQ3ZCW2 172 aaPredicted RBP8.6□□□□□ -1.03
CCDC59-202ENST00000547758 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
CCDC59-202ENST00000547758 UFSP1Q6NVU6 142 aa8.6□□□□□ -1.03
CCDC59-202ENST00000547758 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
CCDC59-202ENST00000547758 DPH3P1Q9H4G8 78 aa8.6□□□□□ -1.03
CCDC59-202ENST00000547758 EIF3GO75821 320 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC59-202ENST00000547758 GCGP01275 180 aa8.59□□□□□ -1.03
CCDC59-202ENST00000547758 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
CCDC59-202ENST00000547758 CRPP02741 224 aa8.59□□□□□ -1.03
CCDC59-202ENST00000547758 ENHOQ6UWT2 76 aa8.59□□□□□ -1.03
CCDC59-202ENST00000547758 SDHCQ99643 169 aaPredicted RBP8.59□□□□□ -1.03
CCDC59-202ENST00000547758 JPT2Q9H910 190 aa8.59□□□□□ -1.03
CCDC59-202ENST00000547758 TRAV6A0A075B6T7 132 aa8.58□□□□□ -1.04
CCDC59-202ENST00000547758 ODF1Q14990 250 aa8.58□□□□□ -1.04
CCDC59-202ENST00000547758 SDIM1Q6ZPB5 146 aa8.58□□□□□ -1.04
CCDC59-202ENST00000547758 OR2G3Q8NGZ4 309 aa8.58□□□□□ -1.04
CCDC59-202ENST00000547758 OR5AC2Q9NZP5 309 aa8.58□□□□□ -1.04
CCDC59-202ENST00000547758 GAS8-AS1O95177 125 aa8.57□□□□□ -1.04
CCDC59-202ENST00000547758 S100A4P26447 101 aaKnown RBP8.57□□□□□ -1.04
CCDC59-202ENST00000547758 RPL19P84098 196 aaKnown RBP8.57□□□□□ -1.04
CCDC59-202ENST00000547758 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms