RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 NXPH4O95158 308 aa13.9□□□□□ -0.18
VDR-204ENST00000547065 FXYD7P58549 80 aa13.9□□□□□ -0.18
VDR-204ENST00000547065 KHDC1LQ5JSQ8 128 aa13.9□□□□□ -0.18
VDR-204ENST00000547065 ITPR3Q14573 2671 aa13.89□□□□□ -0.19
VDR-204ENST00000547065 TRAV26-2A0A0B4J265 109 aa13.89□□□□□ -0.19
VDR-204ENST00000547065 KLHL30-AS1Q8NEE0 82 aa13.89□□□□□ -0.19
VDR-204ENST00000547065 IFI27L1Q96BM0 104 aa13.89□□□□□ -0.19
VDR-204ENST00000547065 MCRIP2Q9BUT9 160 aaKnown RBP13.89□□□□□ -0.19
VDR-204ENST00000547065 SPRY2O43597 315 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 IGKV3-20P01619 116 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 CDKN1BP46527 198 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 HNRNPA3P51991 378 aaKnown RBP13.88□□□□□ -0.19
VDR-204ENST00000547065 LGALS9BQ3B8N2 356 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 LGALS9CQ6DKI2 356 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 ESM1Q9NQ30 184 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 hDV102S1A0JD36 115 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
VDR-204ENST00000547065 AP1S3Q96PC3 154 aa13.88□□□□□ -0.19
VDR-204ENST00000547065 DLX4Q92988 240 aaPredicted RBP13.87□□□□□ -0.19
VDR-204ENST00000547065 NBPF19A0A087WUL8 3843 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 A0A1B0GV90 55 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 CD7P09564 240 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 SCGB2A2Q13296 93 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 DUX3Q96PT4 197 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 PMCHL2Q9BQD1 86 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 MRPS16Q9Y3D3 137 aaKnown RBP13.86□□□□□ -0.19
VDR-204ENST00000547065 LAGE3Q14657 143 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 POM121L12Q8N7R1 296 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 GOLT1BQ9Y3E0 138 aa13.86□□□□□ -0.19
VDR-204ENST00000547065 TRAV12-2A0A075B6T6 113 aa13.85□□□□□ -0.19
VDR-204ENST00000547065 PPP1R17O96001 155 aa13.85□□□□□ -0.19
VDR-204ENST00000547065 AMTNQ6UX39 209 aa13.85□□□□□ -0.19
VDR-204ENST00000547065 IGHV3-16A0A0C4DH30 117 aa13.84□□□□□ -0.19
VDR-204ENST00000547065 SPINK13Q1W4C9 94 aa13.84□□□□□ -0.19
VDR-204ENST00000547065 DYNLRB2Q8TF09 96 aa13.84□□□□□ -0.19
VDR-204ENST00000547065 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
VDR-204ENST00000547065 RASL10AQ92737 203 aa13.84□□□□□ -0.19
VDR-204ENST00000547065 IGHV1OR15-1A0A075B7D0 117 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 MGPP08493 103 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 SMIM17P0DL12 118 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 DEFB131AP59861 70 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 KIF25-AS1Q9Y6Z4 181 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 PDZD2O15018 2839 aa13.83□□□□□ -0.19
VDR-204ENST00000547065 A8MTW9 85 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 RNASE1P07998 156 aaKnown RBP13.83□□□□□ -0.2
VDR-204ENST00000547065 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 TMEM61Q8N0U2 210 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 C9orf85Q96MD7 179 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 SMIM2Q9BVW6 85 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 C16orf95Q9H693 158 aa13.83□□□□□ -0.2
VDR-204ENST00000547065 SUMO2P61956 95 aaKnown RBP13.82□□□□□ -0.2
VDR-204ENST00000547065 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 HLA-DRB4P13762 266 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 NUTF2P61970 127 aaKnown RBP13.81□□□□□ -0.2
VDR-204ENST00000547065 SLC25A34Q6PIV7 304 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 RAX2Q96IS3 184 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 C18orf15Q96N68 181 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 HLA-DRB4X5D2U9 266 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 ZNF469Q96JG9 3925 aaPredicted RBP13.81□□□□□ -0.2
VDR-204ENST00000547065 H3BMM0 161 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 K7EMI3 77 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 TCAPO15273 167 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 ATP5LO75964 103 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 LINC00315P59091 139 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 Q8N1Y9 231 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
VDR-204ENST00000547065 CD28P10747 220 aa13.8□□□□□ -0.2
VDR-204ENST00000547065 MDFICQ9P1T7 246 aa13.8□□□□□ -0.2
VDR-204ENST00000547065 CCDC168Q8NDH2 2452 aa13.8□□□□□ -0.2
VDR-204ENST00000547065 FHL3Q13643 280 aa13.79□□□□□ -0.2
VDR-204ENST00000547065 ORMDL2Q53FV1 153 aa13.79□□□□□ -0.2
VDR-204ENST00000547065 RPL39LQ96EH5 51 aaKnown RBP13.79□□□□□ -0.2
VDR-204ENST00000547065 TMEM160Q9NX00 188 aa13.79□□□□□ -0.2
VDR-204ENST00000547065 TLN2Q9Y4G6 2542 aa13.79□□□□□ -0.2
VDR-204ENST00000547065 TRGV11A0A075B6L2 103 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 CCL24O00175 119 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 PRSS1P07477 247 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 BATFQ16520 125 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 ZNF418Q8TF45 676 aaPredicted RBP13.78□□□□□ -0.2
VDR-204ENST00000547065 FLNAP21333 2647 aaKnown RBP13.78□□□□□ -0.2
VDR-204ENST00000547065 NUDT3O95989 172 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 HIST2H2BDQ6DRA6 164 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 LINC01006Q8NI28 216 aa13.78□□□□□ -0.2
VDR-204ENST00000547065 SPAG8Q99932 426 aaPredicted RBP13.78□□□□□ -0.2
VDR-204ENST00000547065 TSSC4Q9Y5U2 329 aaPredicted RBP13.78□□□□□ -0.2
VDR-204ENST00000547065 RPL32P62910 135 aaKnown RBP13.77□□□□□ -0.21
VDR-204ENST00000547065 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
VDR-204ENST00000547065 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.21
VDR-204ENST00000547065 JPT2Q9H910 190 aa13.77□□□□□ -0.21
VDR-204ENST00000547065 MAP6D1Q9H9H5 199 aa13.77□□□□□ -0.21
VDR-204ENST00000547065 A0A1W2PRX2 142 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 COX8AP10176 69 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 DKK2Q9UBU2 259 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 MYO9AB2RTY4 2548 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 ODF1Q14990 250 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 ZMAT4Q9H898 229 aa13.76□□□□□ -0.21
VDR-204ENST00000547065 HELZ2Q9BYK8 2649 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms