RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ELOF1P60002 83 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 Q5BKY6 102 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 TMEM141Q96I45 108 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 SLC35B3Q9H1N7 401 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 COA4Q9NYJ1 87 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 TAS2R8Q9NYW2 309 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 GINS2Q9Y248 185 aa-0.1□□□□□ -2.43
CCDC38-204ENST00000546816 SPAG17Q6Q759 2223 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 TRAV17A0A0B4J275 112 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 C9JAW5 83 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 TSTD3H0UI37 97 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 SPINK1P00995 79 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 PAEPP09466 180 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 PPP1R1CQ8WVI7 109 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 VPS25Q9BRG1 176 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 BET1LQ9NYM9 111 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 HSPB11Q9Y547 144 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 IGSF10Q6WRI0 2623 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 COL7A1Q02388 2944 aa-0.11□□□□□ -2.43
CCDC38-204ENST00000546816 NCOR2Q9Y618 2525 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 A0A1B0GW64 132 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 TNFSF15O95150 251 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 APOC1P02654 83 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 TFF1P04155 84 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 HLA-DRB4P13762 266 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 OR8B8Q15620 311 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 TMEM244Q5VVB8 128 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 OR2T2Q6IF00 324 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 PRR15LQ9BU68 103 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 HLA-DRB4X5D2U9 266 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 PTPRZ1P23471 2315 aaPredicted RBP-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 UHRF1BP1LA0JNW5 1464 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 ABCA1O95477 2261 aa-0.12□□□□□ -2.43
CCDC38-204ENST00000546816 CCDC171Q6TFL3 1326 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 SOGA1O94964 1423 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 KDM5CP41229 1560 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 A0A087WTM6 91 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 DEGS1O15121 323 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 NEFHP12036 1026 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 NDUFA11Q86Y39 141 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 ATP6V0E2Q8NHE4 81 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 SELENOSQ9BQE4 189 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 BANF2Q9H503 90 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 CALML5Q9NZT1 146 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 HIGD1AQ9Y241 93 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 HELZP42694 1942 aaKnown RBP-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 XIRP1Q702N8 1843 aaKnown RBP-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 POLQO75417 2590 aa-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 CDK13Q14004 1512 aaKnown RBP-0.13□□□□□ -2.43
CCDC38-204ENST00000546816 PTPRMP28827 1452 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 GVQW2A0A096LPI5 108 aaPredicted RBP-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 F2Z2F3 143 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 ZNF670-ZNF695F2Z2N8 137 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 SMIM24O75264 130 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 SLC25A6P12236 298 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 TCTE3Q8IZS6 198 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 DYNLRB2Q8TF09 96 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 BPESC1Q9GZL8 116 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 ABCA4P78363 2273 aa-0.14□□□□□ -2.43
CCDC38-204ENST00000546816 IGF2RP11717 2491 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 GNG14A0A1W2PPG7 69 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 H0YJX3 145 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 RBP4P02753 201 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 ATP11AUNQ6ZP68 121 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 SNX29P2Q8IUI4 249 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 IFI27L1Q96BM0 104 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 NOP16Q9Y3C1 178 aaKnown RBP-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 UNC13BO14795 1591 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 LAMC3Q9Y6N6 1575 aa-0.15□□□□□ -2.43
CCDC38-204ENST00000546816 TNS1Q9HBL0 1735 aaKnown RBP-0.16□□□□□ -2.43
CCDC38-204ENST00000546816 PLXNA2O75051 1894 aa-0.16□□□□□ -2.43
CCDC38-204ENST00000546816 CASZ1Q86V15 1759 aa-0.16□□□□□ -2.43
CCDC38-204ENST00000546816 TCRBV3S1A0A5B6 114 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 RBAKDNA6NC62 111 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 CCL3L1P16619 93 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 CMPK1P30085 196 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 B2MP61769 119 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 MAGOHBQ96A72 148 aaKnown RBP-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 SPANXCQ9NY87 97 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 CELSR1Q9NYQ6 3014 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 CELSR2Q9HCU4 2923 aa-0.16□□□□□ -2.44
CCDC38-204ENST00000546816 ZNF142P52746 1687 aaPredicted RBP-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 HIVEP3Q5T1R4 2406 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 BORCS7-ASMTA0A0B4J1R7 106 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 M0R2P5 195 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 YPEL1O60688 119 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 NPC2P61916 151 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 COX6A2Q02221 97 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 CLLU1Q5K131 121 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 TAC4Q86UU9 113 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 SPANXA1Q9NS26 97 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 ERG28Q9UKR5 140 aa-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 LSM2Q9Y333 95 aaKnown RBP-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 VIRMAQ69YN4 1812 aaKnown RBP-0.17□□□□□ -2.44
CCDC38-204ENST00000546816 SSC5DA1L4H1 1573 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 CCDC179H3BU77 68 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 J3QLW9 94 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 CCDC153Q494R4 210 aa-0.18□□□□□ -2.44
CCDC38-204ENST00000546816 MORN2Q502X0 79 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms