RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 GAGE1Q13065 139 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 GAGE4Q13068 117 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 GAGE5Q13069 117 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 ASB13Q8WXK3 278 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 HYLS1Q96M11 299 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 RPH3ALQ9UNE2 315 aa8.23□□□□□ -1.09
SCAF11-208ENST00000546534 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 LINC00694P0DN24 101 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 INPP1P49441 399 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 S100A10P60903 97 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 ZNF506Q5JVG8 444 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 Q6ZRU5 148 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 Q9UF83 564 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
SCAF11-208ENST00000546534 A0A087WWC5 75 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 S100A5P33763 92 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 UBE2L3P68036 154 aaKnown RBP8.21□□□□□ -1.1
SCAF11-208ENST00000546534 RAB32Q13637 225 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 NIT1Q86X76 327 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 CYB561D1Q8N8Q1 229 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 UBE2WQ96B02 151 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 C2orf50Q96LR7 162 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 C9orf85Q96MD7 179 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 TREM1Q9NP99 234 aa8.21□□□□□ -1.1
SCAF11-208ENST00000546534 NOL3O60936 208 aaKnown RBP8.2□□□□□ -1.1
SCAF11-208ENST00000546534 KRTAP19-4Q3LI73 84 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 TRIQKQ629K1 86 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 PTH2Q96A98 100 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 NMES1Q9C002 83 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 URGCP-MRPS24S4R325 110 aa8.2□□□□□ -1.1
SCAF11-208ENST00000546534 PGPA6NDG6 321 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 SEC11BP0C7V7 166 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 NHLH2Q02577 135 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 IL15RAQ13261 267 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 ATRAIDQ6UW56 229 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 CMTM2Q8TAZ6 248 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 SAMD10Q9BYL1 202 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 KRTAP4-9Q9BYQ8 210 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 PARLQ9H300 379 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 OTORQ9NRC9 128 aa8.19□□□□□ -1.1
SCAF11-208ENST00000546534 PANO1I0J062 215 aa8.18□□□□□ -1.1
SCAF11-208ENST00000546534 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
SCAF11-208ENST00000546534 CENPXA8MT69 81 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
SCAF11-208ENST00000546534 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-208ENST00000546534 ZFP2Q6ZN57 461 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
SCAF11-208ENST00000546534 TMEM75Q8N9X5 138 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 SEC22CQ9BRL7 303 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
SCAF11-208ENST00000546534 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
SCAF11-208ENST00000546534 EIF3GO75821 320 aaKnown RBP eCLIP8.16□□□□□ -1.1
SCAF11-208ENST00000546534 GNG5P63218 68 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 CNPY1Q3B7I2 92 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 KHDC3LQ587J8 217 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 FAM74A1Q5RGS3 127 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 OR10G9Q8NGN4 311 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 SGK494Q96LW2 274 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 SDHCQ99643 169 aaPredicted RBP8.16□□□□□ -1.1
SCAF11-208ENST00000546534 JPT2Q9H910 190 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 MBD2Q9UBB5 411 aa8.16□□□□□ -1.1
SCAF11-208ENST00000546534 A0A087WX48 190 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 A0A0D9SG52 128 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 A8MWV9 139 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 TAAR5O14804 337 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
SCAF11-208ENST00000546534 Q0VG73 95 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 ODF1Q14990 250 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 ELOBQ15370 118 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 ARL6IP6Q8N6S5 226 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 KRTAP4-2Q9BYR5 136 aa8.15□□□□□ -1.1
SCAF11-208ENST00000546534 TNXBP22105 4242 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 C17orf112F2Z3M2 114 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 PRSS1P07477 247 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 TAS2R45P59539 299 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 LGALSLQ3ZCW2 172 aaPredicted RBP8.14□□□□□ -1.11
SCAF11-208ENST00000546534 FFAR4Q5NUL3 377 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 ENHOQ6UWT2 76 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 NDFIP1Q9BT67 221 aa8.14□□□□□ -1.11
SCAF11-208ENST00000546534 TRAV6A0A075B6T7 132 aa8.13□□□□□ -1.11
SCAF11-208ENST00000546534 GCGP01275 180 aa8.13□□□□□ -1.11
SCAF11-208ENST00000546534 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
SCAF11-208ENST00000546534 PLA2G10O15496 165 aa8.12□□□□□ -1.11
SCAF11-208ENST00000546534 TCRBP04435 133 aa8.12□□□□□ -1.11
SCAF11-208ENST00000546534 IL7P13232 177 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms