RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 GOLT1AQ6ZVE7 132 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 TIMM8BQ9Y5J9 83 aaPredicted RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 LOC107984156A0A0G2JMH3 177 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF561-AS1K7EIQ3 104 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 TRACP01848 142 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 TMEM200BQ69YZ2 307 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 SLC25A48Q6ZT89 311 aaKnown RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 ARL17AQ8IVW1 177 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 C1orf159Q96HA4 380 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 RPP21Q9H633 154 aaKnown RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 ITPR2Q14571 2701 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 IGKCP01834 107 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
NECAP1-208ENST00000545807 MRPL20Q9BYC9 149 aaKnown RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 PRRC2AP48634 2157 aaKnown RBP5.19□□□□□ -1.58
NECAP1-208ENST00000545807 ABCA2Q9BZC7 2435 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 NPIPB11E5RHQ5 1161 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 SAA2P0DJI9 122 aaPredicted RBP5.18□□□□□ -1.58
NECAP1-208ENST00000545807 APELAP0DMC3 54 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 LOXL3P58215 753 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 TIRAPP58753 221 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 FBXL19-AS1Q494R0 122 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 DEFB121Q5J5C9 76 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 NTN5Q8WTR8 489 aaPredicted RBP5.18□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF492Q9P255 531 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 VPS13CQ709C8 3753 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 TRAV3A0A0B4J244 114 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 H3BVH4 76 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 MYCNOSP40205 109 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 BRWD1-AS2P59051 145 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 FAM19A1Q7Z5A9 133 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 PRIMA1Q86XR5 153 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF714Q96N38 554 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 SHANK2-AS3Q9BTD1 123 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 U3KQK5 164 aa5.18□□□□□ -1.58
NECAP1-208ENST00000545807 IFI27P40305 119 aaPredicted RBP5.17□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF137PP52743 207 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PRR20EP86478 221 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PRR20CP86479 221 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PRR20DP86480 221 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PRR20BP86481 221 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PRR20AP86496 221 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 C20orf173Q96LM9 149 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 DSCR8Q96T75 97 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PSMB8P28062 276 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 LOXP28300 417 aaPredicted RBP5.17□□□□□ -1.58
NECAP1-208ENST00000545807 TMEM155Q4W5P6 130 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 Q71RC1 249 aaPredicted RBP5.17□□□□□ -1.58
NECAP1-208ENST00000545807 MIR17HGQ75NE6 70 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 PGLYRP4Q96LB8 373 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 S1PR3Q99500 378 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 AGPAT4-IT1Q9H0P7 198 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 TPSG1Q9NRR2 321 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 LINC00527Q9UJ94 153 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 hADV29S1A0JD25 119 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 LINC01546A6NGU7 62 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 DPM2O94777 84 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 GTSCR1Q86UQ5 136 aa5.17□□□□□ -1.58
NECAP1-208ENST00000545807 TET2Q6N021 2002 aaPredicted RBP5.16□□□□□ -1.58
NECAP1-208ENST00000545807 GCN1Q92616 2671 aaKnown RBP5.16□□□□□ -1.58
NECAP1-208ENST00000545807 TRAV13-1A0A0B4J241 112 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 MRPS12O15235 138 aaKnown RBP5.16□□□□□ -1.58
NECAP1-208ENST00000545807 IGKV1-16P04430 117 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 DUTP33316 252 aaKnown RBP5.16□□□□□ -1.58
NECAP1-208ENST00000545807 SRSF9Q13242 221 aaKnown RBP eCLIP5.16□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF56Q15929 161 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 HIST2H2BCQ6DN03 193 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 UPK3BQ9BT76 320 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 IGHV3OR16-10A0A075B7F0 116 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 APRG1Q8IVJ8 170 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 AAMDCQ9H7C9 122 aa5.16□□□□□ -1.58
NECAP1-208ENST00000545807 PEX7O00628 323 aa5.15□□□□□ -1.58
NECAP1-208ENST00000545807 NDUFA11Q86Y39 141 aa5.15□□□□□ -1.58
NECAP1-208ENST00000545807 ZNF843Q8N446 348 aa5.15□□□□□ -1.58
NECAP1-208ENST00000545807 RPUSD1Q9UJJ7 312 aaKnown RBP5.15□□□□□ -1.58
NECAP1-208ENST00000545807 FBN2P35556 2912 aa5.15□□□□□ -1.58
NECAP1-208ENST00000545807 H3BMM0 161 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 AVPP01185 164 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 IGHV3-48P01763 117 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 CGB3P0DN86 165 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 CGB7P0DN87 165 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 FCER1GP30273 86 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 CXCL5P42830 114 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 CRIP2P52943 208 aaPredicted RBP5.15□□□□□ -1.59
NECAP1-208ENST00000545807 TWIST1Q15672 202 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 TMEM170BQ5T4T1 132 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 C5orf38Q86SI9 138 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 SSMEM1Q8WWF3 244 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 UBE2WQ96B02 151 aa5.15□□□□□ -1.59
NECAP1-208ENST00000545807 UBR5O95071 2799 aaPredicted RBP5.15□□□□□ -1.59
NECAP1-208ENST00000545807 FLNAP21333 2647 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms