RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
TDP1-204ENST00000545686 PGPEP1Q9NXJ5 209 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 PTPRQQ9UMZ3 2332 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 RIF1Q5UIP0 2472 aaKnown RBP6.62□□□□□ -1.35
TDP1-204ENST00000545686 IGHV4OR15-8A0A075B7B6 117 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 A0A087WW49 117 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 A0A1B0GV72 72 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 MGPP08493 103 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 ANXA2RQ3ZCQ2 193 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 APOMO95445 188 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 IGF1P05019 195 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 UBE2D3P61077 147 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 UBE2D2P62837 147 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 CDSNQ15517 529 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 TCTEX1D4Q5JR98 221 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 LCNL1Q6ZST4 164 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 H3BUA1 57 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 NBL1P41271 181 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 TMEM141Q96I45 108 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 SPTBN2O15020 2390 aa6.61□□□□□ -1.35
TDP1-204ENST00000545686 CD7P09564 240 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 RNASE3P12724 160 aaKnown RBP6.6□□□□□ -1.35
TDP1-204ENST00000545686 FOXI1Q12951 378 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 TIMM17AQ99595 171 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 KIF25-AS1Q9Y6Z4 181 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 IGLV4-69A0A075B6H9 119 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 IGIPA6NJ69 53 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 TSPAN13O95857 204 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 CRYGDP07320 174 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 LMO4P61968 165 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
TDP1-204ENST00000545686 PMVKQ15126 192 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 USMG5Q96IX5 58 aa6.6□□□□□ -1.35
TDP1-204ENST00000545686 A0A0J9YY99 117 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 DUSP14O95147 198 aaKnown RBP6.59□□□□□ -1.35
TDP1-204ENST00000545686 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
TDP1-204ENST00000545686 LINC00315P59091 139 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 VCX2Q9H322 139 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 CACNA1BQ00975 2339 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 TRBV20-1A0A075B6N2 111 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 J3KRW8 73 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 POLR2KP53803 58 aaKnown RBP6.59□□□□□ -1.35
TDP1-204ENST00000545686 KLRB1Q12918 225 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 ZFP2Q6ZN57 461 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 TP53TG1Q9Y2A0 90 aa6.59□□□□□ -1.35
TDP1-204ENST00000545686 KLLNB2CW77 178 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 VCYO14598 125 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 TSHBP01222 138 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
TDP1-204ENST00000545686 NDUFA11Q86Y39 141 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 MTURNQ8N3F0 131 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 KIR2DL4Q99706 377 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 PTPRZ1P23471 2315 aaPredicted RBP6.58□□□□□ -1.36
TDP1-204ENST00000545686 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 INSL3P51460 131 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 FOXC1Q12948 553 aa6.58□□□□□ -1.36
TDP1-204ENST00000545686 TRBV27A0A0K0K1C4 114 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 GNRH2O43555 120 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 TMEM219Q86XT9 240 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 SBSPONQ8IVN8 264 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 A0A1W2PPR1 153 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 LGALS9O00182 355 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 IGHV3-30P01768 117 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 IGHV3-30-5P0DP03 117 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 PSMB2P49721 201 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 UCNP55089 124 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 ZNF876PQ49A33 203 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 BPESC1Q9GZL8 116 aa6.57□□□□□ -1.36
TDP1-204ENST00000545686 ZFHX2Q9C0A1 2572 aaPredicted RBP6.56□□□□□ -1.36
TDP1-204ENST00000545686 SPRY2O43597 315 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 FAM159AQ6UWV7 190 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 NFE4Q86UQ8 179 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 C10orf126Q8N4M7 172 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 KLHL30-AS1Q8NEE0 82 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 ABCA2Q9BZC7 2435 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 MED13LQ71F56 2210 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 M0QXV9 152 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 IGHV1-69P01742 117 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 IGHG2P01859 326 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 SYT8Q8NBV8 401 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 UBTD1Q9HAC8 227 aa6.56□□□□□ -1.36
TDP1-204ENST00000545686 DAZ1Q9NQZ3 744 aaKnown RBP6.56□□□□□ -1.36
TDP1-204ENST00000545686 F6UB75 175 aa6.55□□□□□ -1.36
TDP1-204ENST00000545686 ID1P41134 155 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms