RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	MCRIP1	C9JLW8	97 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	PYY	P10082	97 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	PLGLB1	Q02325	96 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	SLC25A26	Q70HW3	274 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	PPDPFL	Q8WWR9	84 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	TMEM141	Q96I45	108 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	COA4	Q9NYJ1	87 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	NDUFAF1	Q9Y375	327 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	NSD1	Q96L73	2696 aa	Predicted RBP	-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	OVOS2	A0A0G2JMS6	1433 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639	ARHGAP31	Q2M1Z3	1444 aa		-0.14	□□□□□ -2.43
RAP1B-231	ENST00000544639		C9JAW5	83 aa		-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	DPM2	O94777	84 aa		-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	APOC1	P02654	83 aa		-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	EMX2	Q04743	252 aa		-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	TMEM91	Q6ZNR0	172 aa		-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	SKA2	Q8WVK7	121 aa	Predicted RBP	-0.15	□□□□□ -2.43
RAP1B-231	ENST00000544639	AHCTF1	Q8WYP5	2266 aa		-0.16	□□□□□ -2.43
RAP1B-231	ENST00000544639	CHD9	Q3L8U1	2897 aa		-0.16	□□□□□ -2.43
RAP1B-231	ENST00000544639	TRAV12-2	A0A075B6T6	113 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639		J3KT08	172 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	TFF1	P04155	84 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	AKR1D1	P51857	326 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	ELOF1	P60002	83 aa	Known RBP	-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	SMIM15	Q7Z3B0	74 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	OR8I2	Q8N0Y5	310 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	PPP1R1C	Q8WVI7	109 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	BET1L	Q9NYM9	111 aa		-0.16	□□□□□ -2.44
RAP1B-231	ENST00000544639	FLNC	Q14315	2725 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	MT-ND4L	P03901	98 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	PAEP	P09466	180 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	VPS25	Q9BRG1	176 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	PRR15L	Q9BU68	103 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	SLC35B3	Q9H1N7	401 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	TAS2R8	Q9NYW2	309 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	DNAJC15	Q9Y5T4	150 aa		-0.17	□□□□□ -2.44
RAP1B-231	ENST00000544639	TRAV2	A0A0B4J234	112 aa		-0.18	□□□□□ -2.44
RAP1B-231	ENST00000544639	CALML5	Q9NZT1	146 aa		-0.18	□□□□□ -2.44
RAP1B-231	ENST00000544639	PLXNA2	O75051	1894 aa		-0.18	□□□□□ -2.44
RAP1B-231	ENST00000544639	TRAV36DV7	A0A075B6V5	113 aa		-0.19	□□□□□ -2.44
RAP1B-231	ENST00000544639	TSTD3	H0UI37	97 aa		-0.19	□□□□□ -2.44
RAP1B-231	ENST00000544639	TMEM244	Q5VVB8	128 aa		-0.19	□□□□□ -2.44
RAP1B-231	ENST00000544639	GINS2	Q9Y248	185 aa		-0.19	□□□□□ -2.44
RAP1B-231	ENST00000544639	DST	Q03001	7570 aa	Known RBP	-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	SOGA1	O94964	1423 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639		A0A1B0GX51	115 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639		F2Z2F3	143 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	ZNF670-ZNF695	F2Z2N8	137 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	NEFH	P12036	1026 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	HLA-DRB4	P13762	266 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	HSPB11	Q9Y547	144 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	HLA-DRB4	X5D2U9	266 aa		-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	KIAA0100	Q14667	2235 aa	Known RBP	-0.2	□□□□□ -2.44
RAP1B-231	ENST00000544639	CASZ1	Q86V15	1759 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639		A0A1B0GW64	132 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	SMIM24	O75264	130 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	TNFSF15	O95150	251 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	SCT	P09683	121 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	OR8B8	Q15620	311 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	KRTAP6-1	Q3LI64	71 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	OR2T2	Q6IF00	324 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	SELENOS	Q9BQE4	189 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	BANF2	Q9H503	90 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	CCDC171	Q6TFL3	1326 aa		-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	TNS1	Q9HBL0	1735 aa	Known RBP	-0.21	□□□□□ -2.44
RAP1B-231	ENST00000544639	SLC25A6	P12236	298 aa		-0.22	□□□□□ -2.44
RAP1B-231	ENST00000544639	SNX29P2	Q8IUI4	249 aa		-0.22	□□□□□ -2.44
RAP1B-231	ENST00000544639	BPESC1	Q9GZL8	116 aa		-0.22	□□□□□ -2.44
RAP1B-231	ENST00000544639	DOCK11	Q5JSL3	2073 aa		-0.22	□□□□□ -2.44
RAP1B-231	ENST00000544639	CDK13	Q14004	1512 aa	Known RBP	-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	MUC12	Q9UKN1	5478 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	KDM5C	P41229	1560 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	GVQW2	A0A096LPI5	108 aa	Predicted RBP	-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	DEGS1	O15121	323 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	NBEAP1	P0C6P0	100 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	COX6A2	Q02221	97 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	NDUFA11	Q86Y39	141 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	ATP6V0E2	Q8NHE4	81 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	DYNLRB2	Q8TF09	96 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	VIRMA	Q69YN4	1812 aa	Known RBP	-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	CACNA1A	O00555	2505 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	UHRF1BP1L	A0JNW5	1464 aa		-0.23	□□□□□ -2.45
RAP1B-231	ENST00000544639	TCRBV3S1	A0A5B6	114 aa		-0.24	□□□□□ -2.45
RAP1B-231	ENST00000544639	RBAKDN	A6NC62	111 aa		-0.24	□□□□□ -2.45
RAP1B-231	ENST00000544639	TCTE3	Q8IZS6	198 aa		-0.24	□□□□□ -2.45
RAP1B-231	ENST00000544639	HIGD1A	Q9Y241	93 aa		-0.24	□□□□□ -2.45
RAP1B-231	ENST00000544639	NOP16	Q9Y3C1	178 aa	Known RBP	-0.24	□□□□□ -2.45
RAP1B-231	ENST00000544639	MUC2	Q02817	5179 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	WNK2	Q9Y3S1	2297 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639		A0A087WTM6	91 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	RBP4	P02753	201 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	CMPK1	P30085	196 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	MAGOHB	Q96A72	148 aa	Known RBP	-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	IFI27L1	Q96BM0	104 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	ARAP1	Q96P48	1450 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	KIF13A	Q9H1H9	1805 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	ABCA2	Q9BZC7	2435 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	HMCN2	Q8NDA2	5059 aa		-0.25	□□□□□ -2.45
RAP1B-231	ENST00000544639	LAMC3	Q9Y6N6	1575 aa		-0.26	□□□□□ -2.45
RAP1B-231	ENST00000544639	GNG14	A0A1W2PPG7	69 aa		-0.26	□□□□□ -2.45

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms