RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 TRBV7-9A0A0J9YWB2 115 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 BRI3O95415 125 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 PRSS1P07477 247 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 MSMBP08118 114 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 PTH2Q96A98 100 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
LRTOMT-221ENST00000544409 SMIM20Q8N5G0 67 aa9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 C11orf21Q9P2W6 132 aa9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 ASH1LQ9NR48 2969 aaKnown RBP9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
LRTOMT-221ENST00000544409 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 PF4V1P10720 104 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 RRN3P1Q2M238 152 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
LRTOMT-221ENST00000544409 TMEM8BA6NDV4 472 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 IGHV3-11P01762 117 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 TMEM160Q9NX00 188 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
LRTOMT-221ENST00000544409 IGHV7-4-1A0A0J9YVY3 117 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 B4DSR2 109 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 OVOL1O14753 267 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 BLCAPP62952 87 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 OR10J6PQ8NGY7 276 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 SVEP1Q4LDE5 3571 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 IGKCP01834 107 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 ODF1Q14990 250 aa9.31□□□□□ -0.92
LRTOMT-221ENST00000544409 GPHB5Q86YW7 130 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 ZFYVE26Q68DK2 2539 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 GAS8-AS1O95177 125 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 EVI2AP22794 236 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 DSCR9P59020 149 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 TEX29Q8N6K0 151 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 FOXC2Q99958 501 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 TRBV20-1A0A075B6N2 111 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 SOCS3O14543 225 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 LEPP41159 167 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 SPANXN1Q5VSR9 72 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 ZFAND6Q6FIF0 208 aa9.3□□□□□ -0.92
LRTOMT-221ENST00000544409 PSMB2P49721 201 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 PRR9Q5T870 116 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 Q6ZS46 218 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 SPTAN1Q13813 2472 aaKnown RBP9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 IGLV1-40P01703 118 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
LRTOMT-221ENST00000544409 AVPP01185 164 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 GATA1P15976 413 aaPredicted RBP9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 Q6ZQT7 251 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 Q8N8P6 123 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 H3BVH4 76 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 J3KRW8 73 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 ZFAND2AQ8N6M9 145 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
LRTOMT-221ENST00000544409 HOXA3O43365 443 aaPredicted RBP9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 SLC25A16P16260 332 aa9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 CFHR3Q02985 330 aa9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 MORN3Q6PF18 240 aaPredicted RBP9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 ZMAT4Q9H898 229 aa9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 DAZ1Q9NQZ3 744 aaKnown RBP9.27□□□□□ -0.93
LRTOMT-221ENST00000544409 CCDC179H3BU77 68 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 DPM2O94777 84 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 DLX4Q92988 240 aaPredicted RBP9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 ZNF580Q9UK33 172 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 IGKV3-7A0A075B6H7 116 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 NRACQ8N912 160 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 NRGNQ92686 78 aa9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
LRTOMT-221ENST00000544409 IGLV2-18A0A075B6J9 118 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 TGFAP01135 160 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 LINC01356Q8N9X3 169 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 TMEM158Q8WZ71 300 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 TRAV26-2A0A0B4J265 109 aa9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 S100A4P26447 101 aaKnown RBP9.25□□□□□ -0.93
LRTOMT-221ENST00000544409 ASIPP42127 132 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms