RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 HIST1H2BJP06899 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BOP23527 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BBP33778 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BDP58876 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BCP62807 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 EGFEM1PQ0D2K5 195 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 SLAQ13239 276 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST2H2BEQ16778 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST2H2BFQ5QNW6 126 aaPredicted RBP22.19■■□□□ 1.14
CCM2-219ENST00000544363 SPANXN1Q5VSR9 72 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 ZNF493Q6ZR52 646 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BHQ93079 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BNQ99877 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HIST1H2BMQ99879 126 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 MDFICQ9P1T7 246 aa22.19■■□□□ 1.14
CCM2-219ENST00000544363 HTN1P15515 57 aa22.17■■□□□ 1.14
CCM2-219ENST00000544363 C9orf85Q96MD7 179 aa22.17■■□□□ 1.14
CCM2-219ENST00000544363 TMEM208Q9BTX3 173 aa22.17■■□□□ 1.14
CCM2-219ENST00000544363 CSTL1Q9H114 145 aa22.17■■□□□ 1.14
CCM2-219ENST00000544363 SPRY2O43597 315 aa22.16■■□□□ 1.14
CCM2-219ENST00000544363 KRTAP10-11P60412 298 aa22.16■■□□□ 1.14
CCM2-219ENST00000544363 ZMAT5Q9UDW3 170 aaKnown RBP22.16■■□□□ 1.14
CCM2-219ENST00000544363 KIAA1644Q3SXP7 199 aa22.14■■□□□ 1.14
CCM2-219ENST00000544363 CSNK1G2-AS1Q8NCQ2 148 aa22.14■■□□□ 1.14
CCM2-219ENST00000544363 GOLT1BQ9Y3E0 138 aa22.14■■□□□ 1.14
CCM2-219ENST00000544363 M0R381 172 aa22.13■■□□□ 1.13
CCM2-219ENST00000544363 TMEM191AQ9H0A3 160 aa22.13■■□□□ 1.13
CCM2-219ENST00000544363 IGHV3OR16-12A0A075B7B8 117 aa22.13■■□□□ 1.13
CCM2-219ENST00000544363 LOC102724200A0A096LPH7 203 aaPredicted RBP22.13■■□□□ 1.13
CCM2-219ENST00000544363 PRM2P04554 102 aa22.13■■□□□ 1.13
CCM2-219ENST00000544363 NXPH4O95158 308 aa22.12■■□□□ 1.13
CCM2-219ENST00000544363 DMRTA1Q5VZB9 504 aa22.1■■□□□ 1.13
CCM2-219ENST00000544363 FAM104BQ5XKR9 115 aa22.1■■□□□ 1.13
CCM2-219ENST00000544363 G3V4G9 280 aa22.09■■□□□ 1.13
CCM2-219ENST00000544363 SMIM15Q7Z3B0 74 aa22.09■■□□□ 1.13
CCM2-219ENST00000544363 MUC4Q99102 2169 aa22.09■■□□□ 1.13
CCM2-219ENST00000544363 ZNF415Q09FC8 603 aa22.09■■□□□ 1.13
CCM2-219ENST00000544363 KIR2DL5BA0A0G2JN68 375 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 KIR2DL5BA0A0G2JPC4 375 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 S100A6P06703 90 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 SAMD5Q5TGI4 173 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 AMN1Q8IY45 258 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 KIR2DL5AQ8N109 375 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 KIR2DL5BQ8NHK3 375 aa22.08■■□□□ 1.13
CCM2-219ENST00000544363 EVI2AP22794 236 aa22.07■■□□□ 1.12
CCM2-219ENST00000544363 AZU1P20160 251 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 SRIP30626 198 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 ZNF705AQ6ZN79 300 aaPredicted RBP22.06■■□□□ 1.12
CCM2-219ENST00000544363 C11orf72Q8NBR9 251 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 IGHV4-30-4P0DP06 118 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 NDUFA6P56556 154 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 SYT8Q8NBV8 401 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 GSN-AS1Q9NRJ2 163 aa22.06■■□□□ 1.12
CCM2-219ENST00000544363 APOC4P55056 127 aa22.05■■□□□ 1.12
CCM2-219ENST00000544363 RNF185Q96GF1 192 aa22.04■■□□□ 1.12
CCM2-219ENST00000544363 RCHY1Q96PM5 261 aa22.04■■□□□ 1.12
CCM2-219ENST00000544363 ALKBH7Q9BT30 221 aaPredicted RBP22.04■■□□□ 1.12
CCM2-219ENST00000544363 RAB4AP20338 218 aa22.03■■□□□ 1.12
CCM2-219ENST00000544363 AP1S3Q96PC3 154 aa22.03■■□□□ 1.12
CCM2-219ENST00000544363 MRPL51Q4U2R6 128 aaKnown RBP22.02■■□□□ 1.12
CCM2-219ENST00000544363 SPXQ9BT56 116 aa22.02■■□□□ 1.12
CCM2-219ENST00000544363 PKD1L1Q8TDX9 2849 aa22.02■■□□□ 1.12
CCM2-219ENST00000544363 RNASE8Q8TDE3 154 aaKnown RBP22.02■■□□□ 1.11
CCM2-219ENST00000544363 TMEM263Q8WUH6 116 aaKnown RBP22.02■■□□□ 1.11
CCM2-219ENST00000544363 ZNF876PQ49A33 203 aa22.01■■□□□ 1.11
CCM2-219ENST00000544363 M0R2P5 195 aa22■■□□□ 1.11
CCM2-219ENST00000544363 SNRPEP62304 92 aaKnown RBP22■■□□□ 1.11
CCM2-219ENST00000544363 C14orf178Q8N769 122 aaPredicted RBP22■■□□□ 1.11
CCM2-219ENST00000544363 PTH2Q96A98 100 aa22■■□□□ 1.11
CCM2-219ENST00000544363 DPH3P1Q9H4G8 78 aa22■■□□□ 1.11
CCM2-219ENST00000544363 RIPPLY3P57055 190 aa21.99■■□□□ 1.11
CCM2-219ENST00000544363 U3KQK5 164 aa21.99■■□□□ 1.11
CCM2-219ENST00000544363 C5orf52A6NGY3 159 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 Q0VG73 95 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 RRN3P1Q2M238 152 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 OR10J3Q5JRS4 329 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 COA6Q5JTJ3 125 aaKnown RBP21.98■■□□□ 1.11
CCM2-219ENST00000544363 IL17DQ8TAD2 202 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 JPT2Q9H910 190 aa21.98■■□□□ 1.11
CCM2-219ENST00000544363 A8MZ25 164 aa21.97■■□□□ 1.11
CCM2-219ENST00000544363 D6R8Y8 96 aa21.97■■□□□ 1.11
CCM2-219ENST00000544363 PIK3CD-AS1Q5SR53 167 aa21.97■■□□□ 1.11
CCM2-219ENST00000544363 C16orf74Q96GX8 76 aa21.97■■□□□ 1.11
CCM2-219ENST00000544363 UBE2CO00762 179 aa21.96■■□□□ 1.11
CCM2-219ENST00000544363 CKS2P33552 79 aa21.96■■□□□ 1.11
CCM2-219ENST00000544363 ORMDL3Q8N138 153 aa21.96■■□□□ 1.11
CCM2-219ENST00000544363 C18orf32Q8TCD1 76 aa21.96■■□□□ 1.11
CCM2-219ENST00000544363 KIF25-AS1Q9Y6Z4 181 aa21.96■■□□□ 1.11
CCM2-219ENST00000544363 SMIM17P0DL12 118 aa21.95■■□□□ 1.1
CCM2-219ENST00000544363 DNAH3Q8TD57 4116 aa21.95■■□□□ 1.1
CCM2-219ENST00000544363 PPBPP02775 128 aa21.94■■□□□ 1.1
CCM2-219ENST00000544363 BAGE3Q86Y29 109 aa21.93■■□□□ 1.1
CCM2-219ENST00000544363 PRELID3AQ96N28 172 aa21.93■■□□□ 1.1
CCM2-219ENST00000544363 SMKR1H3BMG3 65 aa21.92■■□□□ 1.1
CCM2-219ENST00000544363 HOXA5P20719 270 aa21.92■■□□□ 1.1
CCM2-219ENST00000544363 LINC00315P59091 139 aa21.92■■□□□ 1.1
CCM2-219ENST00000544363 A0A087WWL8 130 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 PLAC8L1A1L4L8 177 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 NCR2O95944 276 aa21.91■■□□□ 1.1
CCM2-219ENST00000544363 IQCJQ1A5X6 159 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms