RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 COL4A6Q14031 1691 aa8.15□□□□□ -1.11
PCDH9-204ENST00000544246 ANKRD39Q53RE8 183 aa8.15□□□□□ -1.11
PCDH9-204ENST00000544246 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.11
PCDH9-204ENST00000544246 K7EN84 100 aa8.15□□□□□ -1.11
PCDH9-204ENST00000544246 DOCK6Q96HP0 2047 aa8.15□□□□□ -1.11
PCDH9-204ENST00000544246 TRBV10-2A0A0K0K1G8 114 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 MPLKIPQ8TAP9 179 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 GP9P14770 177 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 PDE6GP18545 87 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 FGF23Q9GZV9 251 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-204ENST00000544246 IGHV2-5P01817 119 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 CKAP5Q14008 2032 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 KIR2DL5BA0A0G2JN68 375 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 KIR2DL5BA0A0G2JPC4 375 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 K7ENP7 123 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
PCDH9-204ENST00000544246 KIR2DL5AQ8N109 375 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
PCDH9-204ENST00000544246 GPR179Q6PRD1 2367 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 KLK5Q9Y337 293 aaPredicted RBP8.13□□□□□ -1.11
PCDH9-204ENST00000544246 MDC1Q14676 2089 aaKnown RBP8.13□□□□□ -1.11
PCDH9-204ENST00000544246 DNAJC13O75165 2243 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 COX7BP24311 80 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 TICRRQ7Z2Z1 1910 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 NLRC5Q86WI3 1866 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 GATA1P15976 413 aaPredicted RBP8.13□□□□□ -1.11
PCDH9-204ENST00000544246 DAND5Q8N907 189 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
PCDH9-204ENST00000544246 FAM240AA0A1B0GVK7 77 aa8.12□□□□□ -1.11
PCDH9-204ENST00000544246 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
PCDH9-204ENST00000544246 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
PCDH9-204ENST00000544246 FOXI1Q12951 378 aa8.12□□□□□ -1.11
PCDH9-204ENST00000544246 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
PCDH9-204ENST00000544246 PRR30Q53SZ7 412 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-204ENST00000544246 BPY2O14599 106 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 PDCD11Q14690 1871 aaKnown RBP8.11□□□□□ -1.11
PCDH9-204ENST00000544246 SNRNP200O75643 2136 aaKnown RBP8.11□□□□□ -1.11
PCDH9-204ENST00000544246 SLURP1P55000 103 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 DEFB112Q30KQ8 113 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 IGLV3-9A0A075B6K5 115 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 DEFB136Q30KP8 78 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 Q6ZUT4 128 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 HHLA3Q9XRX5 114 aa8.11□□□□□ -1.11
PCDH9-204ENST00000544246 ZFHX2Q9C0A1 2572 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-204ENST00000544246 H3BT86 120 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 RNF138Q8WVD3 245 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 RP1P56715 2156 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 SPRY2O43597 315 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 DIAPH2-AS1Q14236 149 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 COL6A6A6NMZ7 2263 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 PLXNA4Q9HCM2 1894 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 Q6ZR03 302 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 DOCK4Q8N1I0 1966 aa8.1□□□□□ -1.11
PCDH9-204ENST00000544246 IGHV4-59P01825 116 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 SCN2AQ99250 2005 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 TRAV23DV6A0A075B6W5 121 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 ESM1Q9NQ30 184 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 FAM236CP0DP71 79 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 PIP4P1Q86T03 277 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 TOMM6Q96B49 74 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 WI2-2373I1.2A0A1W2PRP0 233 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 C17orf82Q86X59 251 aaPredicted RBP8.09□□□□□ -1.11
PCDH9-204ENST00000544246 KIR2DL5BQ8NHK3 375 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 GBF1Q92538 1859 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
PCDH9-204ENST00000544246 C11orf86A6NJI1 115 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 WFDC2Q14508 124 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 V9GYY9 64 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 MLST8Q9BVC4 326 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 HIGD1BQ9P298 99 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 TECTAO75443 2155 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 C14orf177Q52M58 125 aa8.08□□□□□ -1.12
PCDH9-204ENST00000544246 A0A0U1RQV1 116 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 LINC00643Q86TS7 51 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 Q8N1Y9 231 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 C16orf54Q6UWD8 224 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 FXYD2P54710 66 aa8.07□□□□□ -1.12
PCDH9-204ENST00000544246 WISP1O95388 367 aa8.06□□□□□ -1.12
PCDH9-204ENST00000544246 VWA8A3KMH1 1905 aa8.06□□□□□ -1.12
PCDH9-204ENST00000544246 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
PCDH9-204ENST00000544246 E9PLD3 99 aa8.06□□□□□ -1.12
PCDH9-204ENST00000544246 KLK12Q9UKR0 248 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 HIST2H2BDQ6DRA6 164 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 IGHV1-58A0A0C4DH39 117 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 KAAG1Q9UBP8 84 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
PCDH9-204ENST00000544246 G3V4G9 280 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms