RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 TRBV20-1A0A075B6N2 111 aa13.05□□□□□ -0.32
NELFA-216ENST00000542778 HLA-DMBP28068 263 aa13.05□□□□□ -0.32
NELFA-216ENST00000542778 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
NELFA-216ENST00000542778 H3BVH4 76 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 HERV-K104P63124 156 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 SCGB1D4Q6XE38 83 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 NDUFV3P56181 108 aaKnown RBP13.04□□□□□ -0.32
NELFA-216ENST00000542778 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 TIMD4Q96H15 378 aa13.04□□□□□ -0.32
NELFA-216ENST00000542778 SRSF8Q9BRL6 282 aaKnown RBP13.04□□□□□ -0.32
NELFA-216ENST00000542778 CFHR4Q92496 578 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 AJUBAQ96IF1 538 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 IGHV1-3A0A0C4DH29 117 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 COX6B1P14854 86 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 TMEM95Q3KNT9 176 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 LY6G5BQ8NDX9 201 aa13.03□□□□□ -0.32
NELFA-216ENST00000542778 CHD6Q8TD26 2715 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE12JA6NER3 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 CCDC179H3BU77 68 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE7O76087 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE12FP0CL80 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE12GP0CL81 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE12IP0CL82 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.32
NELFA-216ENST00000542778 GAGE4Q13068 117 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 ANXA2RQ3ZCQ2 193 aa13.02□□□□□ -0.32
NELFA-216ENST00000542778 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 TGFAP01135 160 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 SLC25A16P16260 332 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 NRGNQ92686 78 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 SCGB3A1Q96QR1 104 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
NELFA-216ENST00000542778 CNIH1O95406 144 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 RPL32P62910 135 aaKnown RBP13.01□□□□□ -0.33
NELFA-216ENST00000542778 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 ERCC8Q13216 396 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 BPESC1Q9GZL8 116 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 DYNAPQ8N1N2 210 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 SMIM2Q9BVW6 85 aa13.01□□□□□ -0.33
NELFA-216ENST00000542778 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
NELFA-216ENST00000542778 RASL10AQ92737 203 aa13□□□□□ -0.33
NELFA-216ENST00000542778 TOMM6Q96B49 74 aa13□□□□□ -0.33
NELFA-216ENST00000542778 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
NELFA-216ENST00000542778 TRAV4A0A0B4J268 109 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 IGHV4-39P01824 125 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 ASIPP42127 132 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 ABCA12Q86UK0 2595 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 PRAC2D3DTV9 90 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 SNCGO76070 127 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 PRTN3P24158 256 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
NELFA-216ENST00000542778 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 CRLF1O75462 422 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 CFC1BP0CG36 223 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 CFC1P0CG37 223 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 BAALCQ8WXS3 180 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 F8W735 103 aaPredicted RBP12.98□□□□□ -0.33
NELFA-216ENST00000542778 LY6LH3BQJ8 138 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 SLC25A20O43772 301 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 ORMDL2Q53FV1 153 aa12.98□□□□□ -0.33
NELFA-216ENST00000542778 TENM4Q6N022 2769 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 TRAV8-2A0A0B4J237 113 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 A0A0J9YY99 117 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 ZNF843Q8N446 348 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 C10orf126Q8N4M7 172 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 M0QXV9 152 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 TIMM23O14925 209 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 SCGB1C2P0DMR2 95 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 IFITM1P13164 125 aa12.97□□□□□ -0.33
NELFA-216ENST00000542778 MFAP4P55083 255 aa12.96□□□□□ -0.33
NELFA-216ENST00000542778 TTC32Q5I0X7 151 aa12.96□□□□□ -0.33
NELFA-216ENST00000542778 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
NELFA-216ENST00000542778 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 RAX2Q96IS3 184 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 ANKRD17O75179 2603 aaKnown RBP12.95□□□□□ -0.34
NELFA-216ENST00000542778 USP9YO00507 2555 aaPredicted RBP12.95□□□□□ -0.34
NELFA-216ENST00000542778 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
NELFA-216ENST00000542778 LMO4P61968 165 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 Q6Q795 121 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
NELFA-216ENST00000542778 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 CENPVL3A0A0U1RRI6 287 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 C9JAW5 83 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 SPANXN1Q5VSR9 72 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 Q6ZS46 218 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 RNF5Q99942 180 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 SLC50A1Q9BRV3 221 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 PRO1854Q9UHT4 67 aa12.94□□□□□ -0.34
NELFA-216ENST00000542778 IGLV11-55A0A075B6I3 123 aa12.93□□□□□ -0.34
NELFA-216ENST00000542778 C2orf66Q6UXQ4 117 aa12.93□□□□□ -0.34
NELFA-216ENST00000542778 SUMO2P61956 95 aaKnown RBP12.93□□□□□ -0.34
NELFA-216ENST00000542778 RNF182Q8N6D2 247 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms