RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 NXPH4O95158 308 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 CACNG7P62955 275 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 TWIST1Q15672 202 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 TMEM256Q8N2U0 113 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 ANK2Q01484 3957 aa9.63□□□□□ -0.87
CHFR-221ENST00000542714 CBY3A6NI87 242 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BKO60814 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BJP06899 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 TRGC1P0CF51 173 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BOP23527 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BBP33778 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BDP58876 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 RAB5BP61020 215 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BCP62807 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
CHFR-221ENST00000542714 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 C1QTNF4Q9BXJ3 329 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
CHFR-221ENST00000542714 IGHV3OR16-12A0A075B7B8 117 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 LOC102724200A0A096LPH7 203 aaPredicted RBP9.61□□□□□ -0.87
CHFR-221ENST00000542714 APCSP02743 223 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 S100A8P05109 93 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 HTN1P15515 57 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 AZU1P20160 251 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 KIAA1644Q3SXP7 199 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
CHFR-221ENST00000542714 M0R381 172 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 RIPPLY3P57055 190 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 ZNF705AQ6ZN79 300 aaPredicted RBP9.6□□□□□ -0.87
CHFR-221ENST00000542714 IL17DQ8TAD2 202 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 TMEM208Q9BTX3 173 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 GOLT1BQ9Y3E0 138 aa9.6□□□□□ -0.87
CHFR-221ENST00000542714 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 FAM104BQ5XKR9 115 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 AMN1Q8IY45 258 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 KIR2DL5BQ8NHK3 375 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 GSN-AS1Q9NRJ2 163 aa9.59□□□□□ -0.87
CHFR-221ENST00000542714 EVI2AP22794 236 aa9.58□□□□□ -0.88
CHFR-221ENST00000542714 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
CHFR-221ENST00000542714 ZMAT5Q9UDW3 170 aaKnown RBP9.58□□□□□ -0.88
CHFR-221ENST00000542714 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
CHFR-221ENST00000542714 DNAH3Q8TD57 4116 aa9.58□□□□□ -0.88
CHFR-221ENST00000542714 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 A8MZ25 164 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 SRIP30626 198 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 APOC4P55056 127 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 MRPL51Q4U2R6 128 aaKnown RBP9.57□□□□□ -0.88
CHFR-221ENST00000542714 JPT2Q9H910 190 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
CHFR-221ENST00000542714 RAB4AP20338 218 aa9.56□□□□□ -0.88
CHFR-221ENST00000542714 KPRPQ5T749 579 aaPredicted RBP9.56□□□□□ -0.88
CHFR-221ENST00000542714 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
CHFR-221ENST00000542714 PTH2Q96A98 100 aa9.56□□□□□ -0.88
CHFR-221ENST00000542714 RCHY1Q96PM5 261 aa9.56□□□□□ -0.88
CHFR-221ENST00000542714 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
CHFR-221ENST00000542714 U3KQK5 164 aa9.56□□□□□ -0.88
CHFR-221ENST00000542714 X6R8D5 127 aa9.56□□□□□ -0.88
CHFR-221ENST00000542714 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 M0R2P5 195 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 NDUFA6P56556 154 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 LINC00315P59091 139 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
CHFR-221ENST00000542714 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 AP1S3Q96PC3 154 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 SPXQ9BT56 116 aa9.55□□□□□ -0.88
CHFR-221ENST00000542714 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 ZNF876PQ49A33 203 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 POM121L12Q8N7R1 296 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 C16orf74Q96GX8 76 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 SAMD10Q9BYL1 202 aa9.54□□□□□ -0.88
CHFR-221ENST00000542714 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
CHFR-221ENST00000542714 C5orf52A6NGY3 159 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 D6R8Y8 96 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 UBE2CO00762 179 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 NCR2O95944 276 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 LINC00310P59036 64 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 IQCJQ1A5X6 159 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 RRN3P1Q2M238 152 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
CHFR-221ENST00000542714 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 C18orf32Q8TCD1 76 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
CHFR-221ENST00000542714 A0A087WWL8 130 aa9.52□□□□□ -0.89
CHFR-221ENST00000542714 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms