RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 NKX6-2Q9C056 277 aaPredicted RBP10.56□□□□□ -0.72
VPS33A-206ENST00000542310 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
VPS33A-206ENST00000542310 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
VPS33A-206ENST00000542310 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
VPS33A-206ENST00000542310 ARL2-SNX15V9GYD0 113 aa10.55□□□□□ -0.72
VPS33A-206ENST00000542310 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 PEX7O00628 323 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 AKR1C8PQ5T2L2 129 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 LELP1Q5T871 98 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 ZFP2Q6ZN57 461 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 Q86TA4 180 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 HIST1H2BAQ96A08 127 aa10.54□□□□□ -0.72
VPS33A-206ENST00000542310 PGPEP1LA6NFU8 196 aa10.53□□□□□ -0.72
VPS33A-206ENST00000542310 A8MWV9 139 aa10.53□□□□□ -0.72
VPS33A-206ENST00000542310 IFNA7P01567 189 aa10.53□□□□□ -0.72
VPS33A-206ENST00000542310 TCEAL7Q9BRU2 100 aa10.53□□□□□ -0.72
VPS33A-206ENST00000542310 IGKV3D-20A0A0C4DH25 116 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 FAM74A7A6NL05 159 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 G3V3Q6 166 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
VPS33A-206ENST00000542310 ASIPP42127 132 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 COX8CQ7Z4L0 72 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 GTSF1LQ9H1H1 148 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 PARLQ9H300 379 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 IL36BQ9NZH7 164 aa10.52□□□□□ -0.73
VPS33A-206ENST00000542310 IGHV3-73A0A0B4J1V6 119 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 UBE2G2P60604 165 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 LAGE3Q14657 143 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
VPS33A-206ENST00000542310 MAP1LC3B2A6NCE7 125 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 PSCAO43653 123 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 RGS21Q2M5E4 152 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 NTN5Q8WTR8 489 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-206ENST00000542310 FMC1Q96HJ9 113 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 MAP1LC3BQ9GZQ8 125 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
VPS33A-206ENST00000542310 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
VPS33A-206ENST00000542310 B4DEV8 164 aa10.49□□□□□ -0.73
VPS33A-206ENST00000542310 RHODO00212 210 aa10.49□□□□□ -0.73
VPS33A-206ENST00000542310 FHITP49789 147 aa10.49□□□□□ -0.73
VPS33A-206ENST00000542310 FGF8P55075 233 aaPredicted RBP10.49□□□□□ -0.73
VPS33A-206ENST00000542310 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 ARPC5O15511 151 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
VPS33A-206ENST00000542310 LGALSLQ3ZCW2 172 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-206ENST00000542310 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 SYT8Q8NBV8 401 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 ZC2HC1AQ96GY0 325 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 CYTL1Q9NRR1 136 aa10.48□□□□□ -0.73
VPS33A-206ENST00000542310 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 KRBOX1C9JBD0 128 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 H3BVH4 76 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 GCSHP23434 173 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 XGP55808 180 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 KRTAP10-1P60331 282 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 UBE2G1P62253 170 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 ZNF345Q14585 488 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 STOML3Q8TAV4 291 aa10.47□□□□□ -0.73
VPS33A-206ENST00000542310 SH2D1AO60880 128 aa10.46□□□□□ -0.73
VPS33A-206ENST00000542310 LTAP01374 205 aa10.46□□□□□ -0.73
VPS33A-206ENST00000542310 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
VPS33A-206ENST00000542310 OR11H4Q8NGC9 324 aa10.46□□□□□ -0.73
VPS33A-206ENST00000542310 A0A087WWC5 75 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 IGHV3-30P01768 117 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 IGHV3-33P01772 117 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 IGHV3-30-3P0DP02 117 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 IGHV3-30-5P0DP03 117 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 CRIP1P50238 77 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 ZNF674Q2M3X9 581 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 Q6ZSN1 163 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 TM2D2Q9BX73 214 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 Q9HAA7 133 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 VPS13BQ7Z7G8 4022 aa10.45□□□□□ -0.74
VPS33A-206ENST00000542310 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 AKR1C3P42330 323 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 GAGE1Q13065 139 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 GAGE4Q13068 117 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 GAGE5Q13069 117 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 TOR2AQ5JU69 321 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 Q8N814 137 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 TMEM70Q9BUB7 260 aa10.44□□□□□ -0.74
VPS33A-206ENST00000542310 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 UMAD1C9J7I0 102 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 M0R036 132 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 TPT1P13693 172 aaKnown RBP10.43□□□□□ -0.74
VPS33A-206ENST00000542310 CST9LP1Q5W188 147 aa10.43□□□□□ -0.74
VPS33A-206ENST00000542310 ZFP82Q8N141 532 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms