RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 C18orf65Q6ZTR6 163 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 DEFB125Q8N687 156 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 GPHB5Q86YW7 130 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 KLHL30-AS1Q8NEE0 82 aa11.39□□□□□ -0.59
VARS2-211ENST00000541562 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
VARS2-211ENST00000541562 IGKCP01834 107 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 DEFB112Q30KQ8 113 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 RNF223E7ERA6 249 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
VARS2-211ENST00000541562 AKAP9Q99996 3911 aa11.38□□□□□ -0.59
VARS2-211ENST00000541562 FGF6P10767 208 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 ODF1Q14990 250 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 TRBV7-1A0A0A6YYK4 115 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 A0A1W2PRX2 142 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 RPS20P60866 119 aaKnown RBP11.37□□□□□ -0.59
VARS2-211ENST00000541562 IGHV3OR16-12A0A075B7B8 117 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 A0A0G2JLM5 398 aa11.37□□□□□ -0.59
VARS2-211ENST00000541562 C1orf122Q6ZSJ8 110 aa11.36□□□□□ -0.59
VARS2-211ENST00000541562 CST9LQ9H4G1 147 aa11.36□□□□□ -0.59
VARS2-211ENST00000541562 RAB9AP51151 201 aa11.36□□□□□ -0.59
VARS2-211ENST00000541562 HELZ2Q9BYK8 2649 aaKnown RBP11.36□□□□□ -0.59
VARS2-211ENST00000541562 LAGE3Q14657 143 aa11.36□□□□□ -0.59
VARS2-211ENST00000541562 CSTL1Q9H114 145 aa11.36□□□□□ -0.59
VARS2-211ENST00000541562 OOSP1A8MZH6 123 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 KRTAP10-9P60411 292 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 DPF1Q92782 380 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 MDFICQ9P1T7 246 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 A0A1B0GW15 77 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 ASIPP42127 132 aa11.35□□□□□ -0.59
VARS2-211ENST00000541562 MSMBP08118 114 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 LGALS9BQ3B8N2 356 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 LGALS9CQ6DKI2 356 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 H7C2G1 150 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 ZFAND2AQ8N6M9 145 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 SPCS1Q9Y6A9 102 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 DUSP14O95147 198 aaKnown RBP11.34□□□□□ -0.59
VARS2-211ENST00000541562 GATD1Q8NB37 220 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
VARS2-211ENST00000541562 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 ZNF56Q15929 161 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 FAM159AQ6UWV7 190 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 DPM2O94777 84 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 P0DMU3 169 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
VARS2-211ENST00000541562 U3KQK5 164 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 SCGB1D4Q6XE38 83 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 NRACQ8N912 160 aa11.33□□□□□ -0.6
VARS2-211ENST00000541562 RBX1P62877 108 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 C10orf105Q8TEF2 133 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 RASL10AQ92737 203 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
VARS2-211ENST00000541562 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.32□□□□□ -0.6
VARS2-211ENST00000541562 PROK1P58294 105 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 CBY1Q9Y3M2 126 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 APOMO95445 188 aa11.32□□□□□ -0.6
VARS2-211ENST00000541562 ADARB2-AS1A8MUL3 147 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 Q8N8P6 123 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
VARS2-211ENST00000541562 Q9UF83 564 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 A6NDN8 102 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 C2orf66Q6UXQ4 117 aa11.31□□□□□ -0.6
VARS2-211ENST00000541562 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
VARS2-211ENST00000541562 SRSF1Q07955 248 aaKnown RBP eCLIP11.3□□□□□ -0.62e-10■□□□□ 10.3
VARS2-211ENST00000541562 OCIAD2Q56VL3 154 aa11.3□□□□□ -0.6
VARS2-211ENST00000541562 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
VARS2-211ENST00000541562 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 SFTPCP11686 197 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 NPC2P61916 151 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
VARS2-211ENST00000541562 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
VARS2-211ENST00000541562 UBR5O95071 2799 aaPredicted RBP11.29□□□□□ -0.6
VARS2-211ENST00000541562 SLURP1P55000 103 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 SAMD5Q5TGI4 173 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
VARS2-211ENST00000541562 MRPL52Q86TS9 123 aaKnown RBP11.29□□□□□ -0.6
VARS2-211ENST00000541562 RNASE3P12724 160 aaKnown RBP11.28□□□□□ -0.6
VARS2-211ENST00000541562 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
VARS2-211ENST00000541562 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
VARS2-211ENST00000541562 TP53TG1Q9Y2A0 90 aa11.28□□□□□ -0.6
VARS2-211ENST00000541562 PPBPP02775 128 aa11.28□□□□□ -0.6
VARS2-211ENST00000541562 SLC25A16P16260 332 aa11.28□□□□□ -0.6
VARS2-211ENST00000541562 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
VARS2-211ENST00000541562 H3BMG7 143 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms