RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 LY6DQ14210 128 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 C20orf78Q9BR46 151 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 A6NDX4 124 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 J3KRW8 73 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 GNRH2O43555 120 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 SLC25A16P16260 332 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 MYOZ3Q8TDC0 251 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 BAALCQ8WXS3 180 aa7.16□□□□□ -1.26
CNOT4-212ENST00000541284 IGLL5B9A064 214 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 M0R381 172 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 OVOL1O14753 267 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 COX6B1P14854 86 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 PLNP26678 52 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 C14orf178Q8N769 122 aaPredicted RBP7.15□□□□□ -1.26
CNOT4-212ENST00000541284 VPS25Q9BRG1 176 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 H7C1H1 209 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 TAL2Q16559 108 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 DPH3P1Q9H4G8 78 aa7.15□□□□□ -1.26
CNOT4-212ENST00000541284 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.27
CNOT4-212ENST00000541284 KLLNB2CW77 178 aa7.15□□□□□ -1.27
CNOT4-212ENST00000541284 NHP2Q9NX24 153 aaKnown RBP7.15□□□□□ -1.27
CNOT4-212ENST00000541284 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.14□□□□□ -1.27
CNOT4-212ENST00000541284 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 AP1S3Q96PC3 154 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 TRBV7-9A0A0J9YWB2 115 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 H3BUA1 57 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 FABP2P12104 132 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 BLCAPP62952 87 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 C12orf74Q32Q52 190 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 IGHV3-11P01762 117 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 LGALS1P09382 135 aaKnown RBP7.14□□□□□ -1.27
CNOT4-212ENST00000541284 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 PRO0461Q9UI25 63 aa7.14□□□□□ -1.27
CNOT4-212ENST00000541284 MXRA5Q9NR99 2828 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 ASIPP42127 132 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 RIPPLY3P57055 190 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
CNOT4-212ENST00000541284 AKAP6Q13023 2319 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 IGHV4OR15-8A0A075B7B6 117 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 A0A087WW49 117 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
CNOT4-212ENST00000541284 MORN3Q6PF18 240 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-212ENST00000541284 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 OR10J6PQ8NGY7 276 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 DCANP1Q8TF63 244 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 ZNF580Q9UK33 172 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 RPL32P62910 135 aaKnown RBP7.13□□□□□ -1.27
CNOT4-212ENST00000541284 C10orf105Q8TEF2 133 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 SCGB3A1Q96QR1 104 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 JPT2Q9H910 190 aa7.13□□□□□ -1.27
CNOT4-212ENST00000541284 IGIPA6NJ69 53 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 GNLYP22749 145 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 POLR2KP53803 58 aaKnown RBP7.12□□□□□ -1.27
CNOT4-212ENST00000541284 LY6EQ16553 131 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 TEX48A0A1B0GUV7 120 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 AVPP01185 164 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 FSHBP01225 129 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 COTL1Q14019 142 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 CHD8Q9HCK8 2581 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 H3BUX3 64 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 DUSP14O95147 198 aaKnown RBP7.12□□□□□ -1.27
CNOT4-212ENST00000541284 PLEKHB2Q96CS7 222 aa7.12□□□□□ -1.27
CNOT4-212ENST00000541284 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-212ENST00000541284 PHLDA3Q9Y5J5 127 aa7.11□□□□□ -1.27
CNOT4-212ENST00000541284 BBC3Q96PG8 261 aaPredicted RBP7.11□□□□□ -1.27
CNOT4-212ENST00000541284 RRN3P1Q2M238 152 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 NCOR2Q9Y618 2525 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 SRD5A1P18405 259 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 WFDC2Q14508 124 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 KRTAP1-3Q8IUG1 177 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 AMELXQ99217 191 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 SPTAN1Q13813 2472 aaKnown RBP7.1□□□□□ -1.27
CNOT4-212ENST00000541284 IGHV4-30-2A0A087WSY4 118 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 MGPP08493 103 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
CNOT4-212ENST00000541284 C11orf86A6NJI1 115 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 UBE2D1P51668 147 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 TSPEAR-AS2P59090 65 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 TMEM95Q3KNT9 176 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 ZNF479Q96JC4 524 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 C9orf85Q96MD7 179 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
CNOT4-212ENST00000541284 MAP1AP78559 2803 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-212ENST00000541284 IGKV3-7A0A075B6H7 116 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 OR11H12B2RN74 326 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 S100A4P26447 101 aaKnown RBP7.09□□□□□ -1.27
CNOT4-212ENST00000541284 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 OR11H1Q8NG94 326 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
CNOT4-212ENST00000541284 K7EMT4 169 aa7.09□□□□□ -1.28
CNOT4-212ENST00000541284 PF4V1P10720 104 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms