RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 GNRH2O43555 120 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 GATCO43716 136 aaKnown RBP7.54□□□□□ -1.2
VPS33A-204ENST00000540669 ATP6V1G1O75348 118 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 GHRHP01286 108 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 APOC3P02656 99 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 RRN3P1Q2M238 152 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 OR10G8Q8NGN5 311 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 NDUFAF3Q9BU61 184 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 CTDSP1Q9GZU7 261 aa7.54□□□□□ -1.2
VPS33A-204ENST00000540669 C7orf77A4D0Y5 90 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 A8MWL6 223 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 EREGO14944 169 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 SPINK4O60575 86 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 ORM1P02763 201 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 ASIPP42127 132 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 ZNF415Q09FC8 603 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 ATRAIDQ6UW56 229 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 C15orf54Q8N8G6 183 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 TMEM208Q9BTX3 173 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 NAGKQ9UJ70 344 aa7.53□□□□□ -1.2
VPS33A-204ENST00000540669 PLECQ15149 4684 aaKnown RBP7.53□□□□□ -1.2
VPS33A-204ENST00000540669 A0A1W2PPQ1 181 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 CBY3A6NI87 242 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 SNAPINO95295 136 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 MT-ND4LP03901 98 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 GZMBP10144 247 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 LGALS9BQ3B8N2 356 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 WDR73Q6P4I2 378 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 RASL10AQ92737 203 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.21
VPS33A-204ENST00000540669 IMMP2LQ96T52 175 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 SPXQ9BT56 116 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 EDA2RQ9HAV5 297 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 GSN-AS1Q9NRJ2 163 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 DKK2Q9UBU2 259 aa7.52□□□□□ -1.21
VPS33A-204ENST00000540669 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 A0A1B0GXF2 115 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 GRIFINA4D1Z8 144 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 LYRM9A8MSI8 78 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 H3BVH4 76 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 ARMS2P0C7Q2 107 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 NUP35Q8NFH5 326 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 OR10AG1Q8NH19 301 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 CELA1Q9UNI1 258 aa7.51□□□□□ -1.21
VPS33A-204ENST00000540669 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
VPS33A-204ENST00000540669 UFSP1Q6NVU6 142 aa7.5□□□□□ -1.21
VPS33A-204ENST00000540669 TIMM8BQ9Y5J9 83 aaPredicted RBP7.5□□□□□ -1.21
VPS33A-204ENST00000540669 TRAV9-1A0A075B6T8 112 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 TEX48A0A1B0GUV7 120 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 CXorf65A6NEN9 183 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 F2Z2F3 143 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 M0R2P5 195 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 Q6ZTI0 123 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 NAT8BQ9UHF3 227 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 KIF25-AS1Q9Y6Z4 181 aa7.49□□□□□ -1.21
VPS33A-204ENST00000540669 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 S100A1P23297 94 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 LINC00315P59091 139 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 FAM222AQ5U5X8 452 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 ZFP82Q8N141 532 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 MUC7Q8TAX7 377 aa7.48□□□□□ -1.21
VPS33A-204ENST00000540669 TMA7Q9Y2S6 64 aaKnown RBP7.48□□□□□ -1.21
VPS33A-204ENST00000540669 TRBV24-1A0A075B6N3 115 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 A0A1B0GUT8 65 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 CACNG7P62955 275 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 ATP5L2Q7Z4Y8 100 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 NOP10Q9NPE3 64 aaKnown RBP7.47□□□□□ -1.21
VPS33A-204ENST00000540669 RPS10P5Q9NQ39 176 aa7.47□□□□□ -1.21
VPS33A-204ENST00000540669 MRPL16Q9NX20 251 aaKnown RBP7.47□□□□□ -1.21
VPS33A-204ENST00000540669 VPS13DQ5THJ4 4388 aa7.46□□□□□ -1.21
VPS33A-204ENST00000540669 DNAH1Q9P2D7 4330 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 DEFB4AO15263 64 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 RS1O15537 224 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 CRYGDP07320 174 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 HTN1P15515 57 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.22
VPS33A-204ENST00000540669 ELOBQ15370 118 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 MSRB1Q9NZV6 116 aa7.46□□□□□ -1.22
VPS33A-204ENST00000540669 TRAV4A0A0B4J268 109 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 A0A1B0GW15 77 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 ZNF876PQ49A33 203 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
VPS33A-204ENST00000540669 PGLYRP4Q96LB8 373 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms