RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 Q8TAT8 98 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 LINC00477Q96M19 166 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 GFRA4Q9GZZ7 299 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 IGKV3-7A0A075B6H7 116 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 TRAV2A0A0B4J234 112 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 K7EP34 96 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 K7EQG2 157 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 CA1P00915 261 aaPredicted RBP12.69□□□□□ -0.38
COPS3-212ENST00000539941 CSN3P07498 182 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 CRIP1P50238 77 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
COPS3-212ENST00000539941 KIAA1644Q3SXP7 199 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 SPATA3Q8NHX4 192 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 SCRT2Q9NQ03 307 aa12.69□□□□□ -0.38
COPS3-212ENST00000539941 C7orf71A4D174 169 aa12.68□□□□□ -0.38
COPS3-212ENST00000539941 C9orf118A6NHY6 69 aa12.68□□□□□ -0.38
COPS3-212ENST00000539941 MTURNQ8N3F0 131 aa12.68□□□□□ -0.38
COPS3-212ENST00000539941 OR8A1Q8NGG7 326 aa12.68□□□□□ -0.38
COPS3-212ENST00000539941 ASCL2Q99929 193 aa12.68□□□□□ -0.38
COPS3-212ENST00000539941 TRBV7-9A0A0J9YWB2 115 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 SYS1-DBNDD2H3BUS1 97 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 SH2D1AO60880 128 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 SSBP4Q9BWG4 385 aaPredicted RBP12.67□□□□□ -0.38
COPS3-212ENST00000539941 SIGLEC8Q9NYZ4 499 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 TCL1AP56279 114 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
COPS3-212ENST00000539941 RNASEKQ6P5S7 137 aaKnown RBP12.67□□□□□ -0.38
COPS3-212ENST00000539941 NDUFA11Q86Y39 141 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 WFDC3Q8IUB2 231 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
COPS3-212ENST00000539941 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
COPS3-212ENST00000539941 HIGD1CA8MV81 97 aa12.66□□□□□ -0.38
COPS3-212ENST00000539941 HIST2H2BDQ6DRA6 164 aa12.66□□□□□ -0.38
COPS3-212ENST00000539941 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
COPS3-212ENST00000539941 SELENOKQ9Y6D0 94 aa12.66□□□□□ -0.38
COPS3-212ENST00000539941 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
COPS3-212ENST00000539941 SAP30O75446 220 aa12.65□□□□□ -0.38
COPS3-212ENST00000539941 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.38
COPS3-212ENST00000539941 RBPMS2Q6ZRY4 209 aaKnown RBP12.65□□□□□ -0.38
COPS3-212ENST00000539941 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
COPS3-212ENST00000539941 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
COPS3-212ENST00000539941 HSPB8Q9UJY1 196 aa12.65□□□□□ -0.38
COPS3-212ENST00000539941 TRAV25A0A0B4J276 109 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 J3QR89 54 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 Q6AWC8 147 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 COX8AP10176 69 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
COPS3-212ENST00000539941 TMEM97Q5BJF2 176 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 FA2HQ7L5A8 372 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 GTSF1Q8WW33 167 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 TMEM158Q8WZ71 300 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 FAM19A4Q96LR4 140 aa12.64□□□□□ -0.39
COPS3-212ENST00000539941 SLAQ13239 276 aa12.63□□□□□ -0.39
COPS3-212ENST00000539941 PSMG4Q5JS54 123 aa12.63□□□□□ -0.39
COPS3-212ENST00000539941 OR2K2Q8NGT1 345 aa12.63□□□□□ -0.39
COPS3-212ENST00000539941 LEPROTL1O95214 131 aa12.62□□□□□ -0.39
COPS3-212ENST00000539941 KRTAP24-1Q3LI83 254 aa12.62□□□□□ -0.39
COPS3-212ENST00000539941 APRG1Q8IVJ8 170 aa12.62□□□□□ -0.39
COPS3-212ENST00000539941 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
COPS3-212ENST00000539941 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
COPS3-212ENST00000539941 SIVA1O15304 175 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 LINC01559Q495D7 138 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 SPAG8Q99932 426 aaPredicted RBP12.61□□□□□ -0.39
COPS3-212ENST00000539941 A0A0J9YX75 114 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 F6UB75 175 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 SPINK4O60575 86 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 NSUN5P1Q3KNT7 163 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
COPS3-212ENST00000539941 LOC102724200A0A096LPH7 203 aaPredicted RBP12.6□□□□□ -0.39
COPS3-212ENST00000539941 A6NJY4 79 aa12.6□□□□□ -0.39
COPS3-212ENST00000539941 DUSP14O95147 198 aaKnown RBP12.6□□□□□ -0.39
COPS3-212ENST00000539941 DEFB1P60022 68 aa12.6□□□□□ -0.39
COPS3-212ENST00000539941 ERASQ7Z444 233 aa12.6□□□□□ -0.39
COPS3-212ENST00000539941 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
COPS3-212ENST00000539941 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
COPS3-212ENST00000539941 A0A1B0GXF2 115 aa12.59□□□□□ -0.39
COPS3-212ENST00000539941 HSD52Q0P140 79 aa12.59□□□□□ -0.39
COPS3-212ENST00000539941 CD300EQ496F6 205 aaPredicted RBP12.59□□□□□ -0.39
COPS3-212ENST00000539941 PGLYRP4Q96LB8 373 aa12.59□□□□□ -0.39
COPS3-212ENST00000539941 A0A1B0GW15 77 aa12.58□□□□□ -0.4
COPS3-212ENST00000539941 ORM1P02763 201 aa12.58□□□□□ -0.4
COPS3-212ENST00000539941 HBBP68871 147 aa12.58□□□□□ -0.4
COPS3-212ENST00000539941 LINC01545Q5VT33 79 aa12.58□□□□□ -0.4
COPS3-212ENST00000539941 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
COPS3-212ENST00000539941 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 hDV102S1A0JD36 115 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 CLUHP3Q96NS8 147 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 ANK2Q01484 3957 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 KLLNB2CW77 178 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms