RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 Q6ZSN1 163 aa11.35□□□□□ -0.59
DDB1-215ENST00000539712 Q86TA4 180 aa11.35□□□□□ -0.59
DDB1-215ENST00000539712 KCNRGQ8N5I3 272 aa11.35□□□□□ -0.59
DDB1-215ENST00000539712 NKX6-2Q9C056 277 aaPredicted RBP11.35□□□□□ -0.59
DDB1-215ENST00000539712 MAP1LC3BQ9GZQ8 125 aa11.35□□□□□ -0.59
DDB1-215ENST00000539712 LY96Q9Y6Y9 160 aa11.35□□□□□ -0.59
DDB1-215ENST00000539712 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
DDB1-215ENST00000539712 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
DDB1-215ENST00000539712 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
DDB1-215ENST00000539712 HIST1H2BAQ96A08 127 aa11.34□□□□□ -0.59
DDB1-215ENST00000539712 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
DDB1-215ENST00000539712 CIDEAO60543 219 aa11.33□□□□□ -0.6
DDB1-215ENST00000539712 ZNF345Q14585 488 aa11.33□□□□□ -0.6
DDB1-215ENST00000539712 SH2D6Q7Z4S9 175 aa11.33□□□□□ -0.6
DDB1-215ENST00000539712 FAT1Q14517 4588 aa11.33□□□□□ -0.6
DDB1-215ENST00000539712 TRAV9-2A0A087WT02 112 aa11.32□□□□□ -0.6
DDB1-215ENST00000539712 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
DDB1-215ENST00000539712 K7EP13 123 aa11.32□□□□□ -0.6
DDB1-215ENST00000539712 FUSP35637 526 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDB1-215ENST00000539712 PPT1P50897 306 aa11.32□□□□□ -0.6
DDB1-215ENST00000539712 NHLRC2Q8NBF2 726 aa11.32□□□□□ -0.6
DDB1-215ENST00000539712 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 KRBOX1C9JBD0 128 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 DNLZQ5SXM8 178 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 MBD3L1Q8WWY6 194 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 PARLQ9H300 379 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 JPT2Q9H910 190 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 IL36BQ9NZH7 164 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 Q9UF83 564 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 ZFP30Q9Y2G7 519 aa11.31□□□□□ -0.6
DDB1-215ENST00000539712 SH2D1AO60880 128 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 EVI2AP22794 236 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 RHOHQ15669 191 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
DDB1-215ENST00000539712 A0A087WTM6 91 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 B4DEV8 164 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 LTAP01374 205 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 CRYGDP07320 174 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 MGST1P10620 155 aaKnown RBP11.29□□□□□ -0.6
DDB1-215ENST00000539712 ASIPP42127 132 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 ZNF674Q2M3X9 581 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 FMC1Q96HJ9 113 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
DDB1-215ENST00000539712 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 M0R036 132 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 PAGE4O60829 102 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
DDB1-215ENST00000539712 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 FAM162BQ5T6X4 162 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 SCRT2Q9NQ03 307 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 PGPEP1Q9NXJ5 209 aa11.28□□□□□ -0.6
DDB1-215ENST00000539712 A0A0D9SG52 128 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 GRIFINA4D1Z8 144 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 A8MWV9 139 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 H3BVH4 76 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 BCL2L11O43521 198 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 ERVFC1-1P60608 527 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 LGALSLQ3ZCW2 172 aaPredicted RBP11.27□□□□□ -0.61
DDB1-215ENST00000539712 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 DNAH8Q96JB1 4490 aa11.27□□□□□ -0.61
DDB1-215ENST00000539712 LELP1Q5T871 98 aa11.26□□□□□ -0.61
DDB1-215ENST00000539712 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
DDB1-215ENST00000539712 ZNF471Q9BX82 626 aaPredicted RBP11.26□□□□□ -0.61
DDB1-215ENST00000539712 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
DDB1-215ENST00000539712 A0A1B0GV50 99 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 IBA57-AS1B1ANH7 110 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 UBE2G1P62253 170 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 C10orf126Q8N4M7 172 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
DDB1-215ENST00000539712 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
DDB1-215ENST00000539712 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
DDB1-215ENST00000539712 Q8N1X5 172 aa11.24□□□□□ -0.61
DDB1-215ENST00000539712 Q8N3U1 123 aa11.24□□□□□ -0.61
DDB1-215ENST00000539712 MLST8Q9BVC4 326 aa11.24□□□□□ -0.61
DDB1-215ENST00000539712 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 KANTRA0A1W2PQU2 76 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 GAGE12JA6NER3 117 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 AKR1C3P42330 323 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 CCL20P78556 96 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 GAGE1Q13065 139 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 GAGE4Q13068 117 aa11.23□□□□□ -0.61
DDB1-215ENST00000539712 GAGE5Q13069 117 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms