RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 IGHV1-69P01742 117 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 IGHG2P01859 326 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
UBE3B-209ENST00000539584 POLR2KP53803 58 aaKnown RBP10□□□□□ -0.81
UBE3B-209ENST00000539584 PMVKQ15126 192 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
UBE3B-209ENST00000539584 DMXL2Q8TDJ6 3036 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 AKAP13Q12802 2813 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 A0A1W2PPR1 153 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 K7EMT4 169 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 KALRNO60229 2985 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 AZU1P20160 251 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 ID1P41134 155 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBE3B-209ENST00000539584 ETDBQ3ZM63 59 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 VCX2Q9H322 139 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 UBTD1Q9HAC8 227 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 TSSC4Q9Y5U2 329 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-209ENST00000539584 TRBV6-5A0A0K0K1A5 114 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 LINC00315P59091 139 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-209ENST00000539584 DAZ1Q9NQZ3 744 aaKnown RBP9.99□□□□□ -0.81
UBE3B-209ENST00000539584 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
UBE3B-209ENST00000539584 PIEZO2Q9H5I5 2752 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 TRBV20-1A0A075B6N2 111 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 NDUFS8O00217 210 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 CRYGDP07320 174 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
UBE3B-209ENST00000539584 J3KRW8 73 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 GNRH2O43555 120 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 RHPN1-AS1Q9BWJ2 59 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 RIF1Q5UIP0 2472 aaKnown RBP9.97□□□□□ -0.81
UBE3B-209ENST00000539584 TRBV27A0A0K0K1C4 114 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 UBE2D3P61077 147 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 UBE2D2P62837 147 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 RPL11P62913 178 aaKnown RBP9.97□□□□□ -0.81
UBE3B-209ENST00000539584 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 TP53TG1Q9Y2A0 90 aa9.97□□□□□ -0.81
UBE3B-209ENST00000539584 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 LGALS9O00182 355 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.81
UBE3B-209ENST00000539584 APOMO95445 188 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 CD7P09564 240 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 SH2D6Q7Z4S9 175 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 GTSF1LQ9H1H1 148 aa9.96□□□□□ -0.81
UBE3B-209ENST00000539584 ATMQ13315 3056 aa9.96□□□□□ -0.82
UBE3B-209ENST00000539584 A0A0J9YY99 117 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 TRBV12-3P01733 135 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 TSHBP01222 138 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 IGLV1-40P01703 118 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 FOXI1Q12951 378 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
UBE3B-209ENST00000539584 A0A1B0GV72 72 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 A6NDX4 124 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 RHOHQ15669 191 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 SYT8Q8NBV8 401 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 LINC00527Q9UJ94 153 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 GVINP1Q7Z2Y8 2422 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 AGRNO00468 2067 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 TLN1Q9Y490 2541 aaKnown RBP9.94□□□□□ -0.82
UBE3B-209ENST00000539584 PTPRQQ9UMZ3 2332 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 TSPAN13O95857 204 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 NFE4Q86UQ8 179 aa9.94□□□□□ -0.82
UBE3B-209ENST00000539584 SDHAF1A6NFY7 115 aa9.93□□□□□ -0.82
UBE3B-209ENST00000539584 PF4V1P10720 104 aa9.93□□□□□ -0.82
UBE3B-209ENST00000539584 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
UBE3B-209ENST00000539584 NSUN5P1Q3KNT7 163 aa9.93□□□□□ -0.82
UBE3B-209ENST00000539584 PLEKHB2Q96CS7 222 aa9.93□□□□□ -0.82
UBE3B-209ENST00000539584 F6UB75 175 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 TCTEX1D4Q5JR98 221 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 PIMREGQ9BSJ6 248 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 M0QXV9 152 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 C10orf126Q8N4M7 172 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
UBE3B-209ENST00000539584 ZFHX2Q9C0A1 2572 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-209ENST00000539584 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
UBE3B-209ENST00000539584 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
UBE3B-209ENST00000539584 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
UBE3B-209ENST00000539584 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 TMEM89A2RUT3 159 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 F5H697 171 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 IGHV3-11P01762 117 aa9.9□□□□□ -0.82
UBE3B-209ENST00000539584 PSMB2P49721 201 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms