RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZNF48Q96MX3 618 aaPredicted RBP11.33□□□□□ -0.6
CACNB1-206ENST00000539338 NCOA6Q14686 2063 aaPredicted RBP11.33□□□□□ -0.6
CACNB1-206ENST00000539338 TRBV20-1A0A075B6N2 111 aa11.33□□□□□ -0.6
CACNB1-206ENST00000539338 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
CACNB1-206ENST00000539338 F5H768 121 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 H3BMM0 161 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 MSMPQ1L6U9 139 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 ARHGAP21Q5T5U3 1957 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 ZFP36P26651 326 aaKnown RBP11.32□□□□□ -0.6
CACNB1-206ENST00000539338 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 TMEM243Q9BU79 118 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 IGLV11-55A0A075B6I3 123 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 FRMD6-AS1P0C7T7 363 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
CACNB1-206ENST00000539338 PRO1854Q9UHT4 67 aa11.32□□□□□ -0.6
CACNB1-206ENST00000539338 CTSGP08311 255 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 NPBQ8NG41 125 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
CACNB1-206ENST00000539338 NXPH4O95158 308 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
CACNB1-206ENST00000539338 PLCE1Q9P212 2302 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 F8W1H4 67 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 HIST2H2BCQ6DN03 193 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
CACNB1-206ENST00000539338 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 ATP6V0BQ99437 205 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 A0A096LPF7 62 aa11.3□□□□□ -0.6
CACNB1-206ENST00000539338 H3BUA1 57 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
CACNB1-206ENST00000539338 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 PPDPFLQ8WWR9 84 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 SIVA1O15304 175 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 BLCAPP62952 87 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 EDA2RQ9HAV5 297 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 KIAA1549LQ6ZVL6 1849 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 CGB7P0DN87 165 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 TAL2Q16559 108 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 Q6ZPA2 131 aa11.29□□□□□ -0.6
CACNB1-206ENST00000539338 DNAJC30Q96LL9 226 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 NCKAP5O14513 1909 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 TEX22C9J3V5 150 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 CCL25O15444 150 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
CACNB1-206ENST00000539338 NDUFA11Q86Y39 141 aa11.27□□□□□ -0.6
CACNB1-206ENST00000539338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.27□□□□□ -0.61
CACNB1-206ENST00000539338 IGKV2-29A2NJV5 120 aaPredicted RBP11.27□□□□□ -0.61
CACNB1-206ENST00000539338 AJUBAQ96IF1 538 aa11.27□□□□□ -0.61
CACNB1-206ENST00000539338 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
CACNB1-206ENST00000539338 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.61
CACNB1-206ENST00000539338 BUB3O43684 328 aa11.27□□□□□ -0.61
CACNB1-206ENST00000539338 Q8N9W7 124 aa11.27□□□□□ -0.61
CACNB1-206ENST00000539338 CLPSL2Q6UWE3 100 aa11.26□□□□□ -0.61
CACNB1-206ENST00000539338 U3KQE9 123 aa11.26□□□□□ -0.61
CACNB1-206ENST00000539338 CCL18P55774 89 aa11.26□□□□□ -0.61
CACNB1-206ENST00000539338 IGLV1-47P01700 117 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 DEFB125Q8N687 156 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 MBD6Q96DN6 1003 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 NOP10Q9NPE3 64 aaKnown RBP11.25□□□□□ -0.61
CACNB1-206ENST00000539338 ADAMTS9Q9P2N4 1935 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 PCDH15Q96QU1 1955 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 CRIP3Q6Q6R5 217 aa11.25□□□□□ -0.61
CACNB1-206ENST00000539338 CHD3Q12873 2000 aaKnown RBP11.24□□□□□ -0.61
CACNB1-206ENST00000539338 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
CACNB1-206ENST00000539338 Q8N7P7 452 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 SLURP1P55000 103 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 HERVK_113P63121 156 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 UTF1Q5T230 341 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 LINC01545Q5VT33 79 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 K7EMI3 77 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 RNF183Q96D59 192 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 WI2-2373I1.2A0A1W2PRP0 233 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 CARD19Q96LW7 228 aa11.24□□□□□ -0.61
CACNB1-206ENST00000539338 SOCS3O14543 225 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 NCOR2Q9Y618 2525 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 TTTY13Q9BZ97 58 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 RHOHQ15669 191 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 GAGE12HA6NDE8 117 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 C19orf84I3L1E1 186 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 IGHV4-31P0DP07 118 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 DEFB1P60022 68 aa11.23□□□□□ -0.61
CACNB1-206ENST00000539338 PROP1O75360 226 aa11.22□□□□□ -0.61
CACNB1-206ENST00000539338 C16orf54Q6UWD8 224 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms