RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 HIST2H2BEQ16778 126 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.25□□□□□ -0.29
DDX11-212ENST00000538740 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 Q8N1Y9 231 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 OR10AG1Q8NH19 301 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 HIST1H2BHQ93079 126 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 HIST1H2BNQ99877 126 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 HIST1H2BMQ99879 126 aa13.25□□□□□ -0.29
DDX11-212ENST00000538740 FRMD6-AS1P0C7T7 363 aa13.24□□□□□ -0.29
DDX11-212ENST00000538740 RNASE3P12724 160 aaKnown RBP13.24□□□□□ -0.29
DDX11-212ENST00000538740 APOC4P55056 127 aa13.24□□□□□ -0.29
DDX11-212ENST00000538740 AP1S3Q96PC3 154 aa13.24□□□□□ -0.29
DDX11-212ENST00000538740 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
DDX11-212ENST00000538740 MUC21A0A0G2JKD1 596 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 MUC21A0A140T8X8 626 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 M0R381 172 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 SSTP61278 116 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 SLAQ13239 276 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
DDX11-212ENST00000538740 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 NXPH4O95158 308 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 RBMY1A1P0DJD3 496 aaKnown RBP13.22□□□□□ -0.29
DDX11-212ENST00000538740 RBMY1CP0DJD4 496 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 NDUFA6P56556 154 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 RBMY1FQ15415 496 aaKnown RBP13.22□□□□□ -0.29
DDX11-212ENST00000538740 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 SPXQ9BT56 116 aa13.22□□□□□ -0.29
DDX11-212ENST00000538740 SMIM17P0DL12 118 aa13.21□□□□□ -0.29
DDX11-212ENST00000538740 HTN1P15515 57 aa13.21□□□□□ -0.29
DDX11-212ENST00000538740 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
DDX11-212ENST00000538740 FAM104BQ5XKR9 115 aa13.21□□□□□ -0.29
DDX11-212ENST00000538740 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.29
DDX11-212ENST00000538740 PPBPP02775 128 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 SRIP30626 198 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 EGFEM1PQ0D2K5 195 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 PIK3CD-AS1Q5SR53 167 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 DPH3P1Q9H4G8 78 aa13.2□□□□□ -0.3
DDX11-212ENST00000538740 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 KIAA1644Q3SXP7 199 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 OXLD1Q5BKU9 147 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 C1orf158Q8N1D5 194 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 PTH2Q96A98 100 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 NDUFAF3Q9BU61 184 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 MDFICQ9P1T7 246 aa13.19□□□□□ -0.3
DDX11-212ENST00000538740 TENM1Q9UKZ4 2725 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 UBE2CO00762 179 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 Q0VG73 95 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 AMN1Q8IY45 258 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
DDX11-212ENST00000538740 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 MSRB1Q9NZV6 116 aa13.18□□□□□ -0.3
DDX11-212ENST00000538740 M0R2P5 195 aa13.17□□□□□ -0.3
DDX11-212ENST00000538740 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
DDX11-212ENST00000538740 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
DDX11-212ENST00000538740 ALKBH7Q9BT30 221 aaPredicted RBP13.17□□□□□ -0.3
DDX11-212ENST00000538740 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
DDX11-212ENST00000538740 MUC4Q99102 2169 aa13.16□□□□□ -0.3
DDX11-212ENST00000538740 CKS2P33552 79 aa13.16□□□□□ -0.3
DDX11-212ENST00000538740 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
DDX11-212ENST00000538740 MRAP2Q96G30 205 aa13.16□□□□□ -0.3
DDX11-212ENST00000538740 NOTCH3Q9UM47 2321 aa13.16□□□□□ -0.3
DDX11-212ENST00000538740 C5orf52A6NGY3 159 aa13.15□□□□□ -0.3
DDX11-212ENST00000538740 SMIM9A6NGZ8 99 aa13.15□□□□□ -0.3
DDX11-212ENST00000538740 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
DDX11-212ENST00000538740 RAB4AP20338 218 aa13.15□□□□□ -0.3
DDX11-212ENST00000538740 EVI2AP22794 236 aa13.15□□□□□ -0.3
DDX11-212ENST00000538740 SNRPEP62304 92 aaKnown RBP13.15□□□□□ -0.3
DDX11-212ENST00000538740 ZNF876PQ49A33 203 aa13.15□□□□□ -0.3
DDX11-212ENST00000538740 MRPL51Q4U2R6 128 aaKnown RBP13.15□□□□□ -0.3
DDX11-212ENST00000538740 ZNF705AQ6ZN79 300 aaPredicted RBP13.15□□□□□ -0.3
DDX11-212ENST00000538740 A8MWV9 139 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 PPP1R17O96001 155 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 S100A2P29034 98 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 PRELID3AQ96N28 172 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 GSN-AS1Q9NRJ2 163 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 U3KQK5 164 aa13.14□□□□□ -0.31
DDX11-212ENST00000538740 D6R8Y8 96 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 MGPP08493 103 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 IGHV4-30-4P0DP06 118 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 HOXA5P20719 270 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 C18orf32Q8TCD1 76 aa13.13□□□□□ -0.31
DDX11-212ENST00000538740 MEGF8Q7Z7M0 2845 aa13.12□□□□□ -0.31
DDX11-212ENST00000538740 A8MZ25 164 aa13.12□□□□□ -0.31
DDX11-212ENST00000538740 SAMD5Q5TGI4 173 aa13.12□□□□□ -0.31
DDX11-212ENST00000538740 C14orf178Q8N769 122 aaPredicted RBP13.12□□□□□ -0.31
DDX11-212ENST00000538740 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
DDX11-212ENST00000538740 RNF185Q96GF1 192 aa13.12□□□□□ -0.31
DDX11-212ENST00000538740 MGAM2Q2M2H8 2515 aa13.12□□□□□ -0.31
DDX11-212ENST00000538740 RHODO00212 210 aa13.11□□□□□ -0.31
DDX11-212ENST00000538740 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
DDX11-212ENST00000538740 MAP1LC3AQ9H492 121 aa13.1□□□□□ -0.31
DDX11-212ENST00000538740 SPRY2O43597 315 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms