RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 SPG11Q96JI7 2443 aa4.98□□□□□ -1.61
USP28-206ENST00000538224 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
USP28-206ENST00000538224 FAM208BQ5VWN6 2430 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 TRGV11A0A075B6L2 103 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 SIVA1O15304 175 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 DPM2O94777 84 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 ZNF688P0C7X2 276 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 SCGB1A1P11684 91 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 HLA-DRB4P13762 266 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 PLNP26678 52 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 SUMO2P61956 95 aaKnown RBP4.97□□□□□ -1.61
USP28-206ENST00000538224 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 KRTAP1-3Q8IUG1 177 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 TMEM158Q8WZ71 300 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 HLA-DRB4X5D2U9 266 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 CREBBPQ92793 2442 aa4.97□□□□□ -1.61
USP28-206ENST00000538224 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 A8MTW9 85 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.96□□□□□ -1.62
USP28-206ENST00000538224 CD5LO43866 347 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 NUDT3O95989 172 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 IGKCP01834 107 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 PRSS1P07477 247 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 MGPP08493 103 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 CD7P09564 240 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 RNASE3P12724 160 aaKnown RBP4.96□□□□□ -1.62
USP28-206ENST00000538224 SRD5A1P18405 259 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 ODF1Q14990 250 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 TCTEX1D4Q5JR98 221 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 C10orf99Q6UWK7 81 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 ZFYVE26Q68DK2 2539 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 FBN2P35556 2912 aa4.96□□□□□ -1.62
USP28-206ENST00000538224 CENPEQ02224 2701 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 CELSR1Q9NYQ6 3014 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 NAV2Q8IVL1 2488 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 IGHV1OR15-1A0A075B7D0 117 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 TRAV26-2A0A0B4J265 109 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 TRAV12-3A0A0B4J271 114 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 TRAV25A0A0B4J276 109 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 J3QKU1 62 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 GATA1P15976 413 aaPredicted RBP4.95□□□□□ -1.62
USP28-206ENST00000538224 TFPI2P48307 235 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 HINT1P49773 126 aaPredicted RBP4.95□□□□□ -1.62
USP28-206ENST00000538224 PTTG1IPP53801 180 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 SEC11AP67812 179 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 TMEM97Q5BJF2 176 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 PIK3CD-AS1Q5SR53 167 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 C14orf178Q8N769 122 aaPredicted RBP4.95□□□□□ -1.62
USP28-206ENST00000538224 DYNLRB2Q8TF09 96 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 RASL10AQ92737 203 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 TOMM6Q96B49 74 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 C18orf15Q96N68 181 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 DUX5Q96PT3 197 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 ZMAT4Q9H898 229 aa4.95□□□□□ -1.62
USP28-206ENST00000538224 CSPG4Q6UVK1 2322 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 A0A087WX48 190 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 IGHV3-16A0A0C4DH30 117 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 DNAJC9-AS1A6NH13 148 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 H7C1H1 209 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 GNRH2O43555 120 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 EDN2P20800 178 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 DEFB1P60022 68 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 HSD52Q0P140 79 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 KHDC1LQ5JSQ8 128 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 Q6ZQT7 251 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 BOD1L2Q8IYS8 172 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 STPG4Q8N801 248 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 KLHL30-AS1Q8NEE0 82 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 OR11H1Q8NG94 326 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 CLUHP3Q96NS8 147 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 JMJD8Q96S16 334 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 KIR2DL4Q99706 377 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 SPAG8Q99932 426 aaPredicted RBP4.94□□□□□ -1.62
USP28-206ENST00000538224 FOXC2Q99958 501 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 VPS25Q9BRG1 176 aa4.94□□□□□ -1.62
USP28-206ENST00000538224 USP9YO00507 2555 aaPredicted RBP4.94□□□□□ -1.62
USP28-206ENST00000538224 A6NDN8 102 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 F8VRH5 84 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 K7ERU9 68 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 VCYO14598 125 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 CCL25O15444 150 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 GAS8-AS1O95177 125 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 FGF6P10767 208 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 PLA2G2AP14555 144 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 SLURP1P55000 103 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 CMC4P56277 68 aaPredicted RBP4.93□□□□□ -1.62
USP28-206ENST00000538224 FXYD7P58549 80 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 ZNF415Q09FC8 603 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 SPINK13Q1W4C9 94 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 MPV17L2Q567V2 206 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 PAPPA-AS1Q5QFB9 102 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 SUMO4Q6EEV6 95 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 AMTNQ6UX39 209 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 Q6ZSV7 163 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 ERASQ7Z444 233 aa4.93□□□□□ -1.62
USP28-206ENST00000538224 TRPT1Q86TN4 253 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms