RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 IGLC6P0CF74 106 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 IGLL1P15814 213 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 CDKN1BP46527 198 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 CMC4P56277 68 aaPredicted RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
PXN-208ENST00000538144 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
PXN-208ENST00000538144 STAB1Q9NY15 2570 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 C3orf79P0CE67 100 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 TSPOP30536 169 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 STHQ8IWL8 128 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 FAM19A2Q8N3H0 131 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
PXN-208ENST00000538144 C7orf71A4D174 169 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 A8MTW9 85 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 HSBP1O75506 76 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 PRR31Q5SQ13 230 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 MUC21Q5SSG8 566 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 TPPP3Q9BW30 176 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 U3KQK5 164 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 KRTDAPP60985 99 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 LBHQ53QV2 105 aaPredicted RBP11.14□□□□□ -0.63
PXN-208ENST00000538144 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
PXN-208ENST00000538144 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
PXN-208ENST00000538144 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
PXN-208ENST00000538144 SSTP61278 116 aa11.12□□□□□ -0.63
PXN-208ENST00000538144 TDRG1Q3Y452 100 aa11.12□□□□□ -0.63
PXN-208ENST00000538144 BORCS7Q96B45 105 aa11.12□□□□□ -0.63
PXN-208ENST00000538144 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
PXN-208ENST00000538144 CRXO43186 299 aaPredicted RBP11.12□□□□□ -0.63
PXN-208ENST00000538144 NTF3P20783 257 aa11.12□□□□□ -0.63
PXN-208ENST00000538144 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
PXN-208ENST00000538144 MUC21A0A0G2JKD1 596 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 MUC21A0A140T8X8 626 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 RAB4AP20338 218 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
PXN-208ENST00000538144 IGHV1-24A0A0C4DH33 117 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 GNRH2O43555 120 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 DEFB125Q8N687 156 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 VAMP8Q9BV40 100 aa11.1□□□□□ -0.63
PXN-208ENST00000538144 LINC00614P0C842 121 aa11.09□□□□□ -0.63
PXN-208ENST00000538144 RBMY1A1P0DJD3 496 aaKnown RBP11.09□□□□□ -0.63
PXN-208ENST00000538144 RBMY1CP0DJD4 496 aa11.09□□□□□ -0.63
PXN-208ENST00000538144 RBMY1FQ15415 496 aaKnown RBP11.09□□□□□ -0.63
PXN-208ENST00000538144 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
PXN-208ENST00000538144 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
PXN-208ENST00000538144 MDFIQ99750 246 aa11.09□□□□□ -0.63
PXN-208ENST00000538144 WIPF1O43516 503 aa11.08□□□□□ -0.64
PXN-208ENST00000538144 OR5AL1P0C617 328 aa11.08□□□□□ -0.64
PXN-208ENST00000538144 C2orf88Q9BSF0 95 aa11.08□□□□□ -0.64
PXN-208ENST00000538144 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
PXN-208ENST00000538144 TIMM8BQ9Y5J9 83 aaPredicted RBP11.08□□□□□ -0.64
PXN-208ENST00000538144 H3BVH4 76 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
PXN-208ENST00000538144 NUTF2P61970 127 aaKnown RBP11.07□□□□□ -0.64
PXN-208ENST00000538144 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
PXN-208ENST00000538144 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
PXN-208ENST00000538144 ASIPP42127 132 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 MRPL51Q4U2R6 128 aaKnown RBP11.07□□□□□ -0.64
PXN-208ENST00000538144 SPATA12Q7Z6I5 190 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
PXN-208ENST00000538144 SPRY2O43597 315 aa11.06□□□□□ -0.64
PXN-208ENST00000538144 HTN1P15515 57 aa11.06□□□□□ -0.64
PXN-208ENST00000538144 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
PXN-208ENST00000538144 PAM16Q9Y3D7 125 aa11.06□□□□□ -0.64
PXN-208ENST00000538144 INSP01308 110 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 TWIST1Q15672 202 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
PXN-208ENST00000538144 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 Q8N1Y9 231 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 OR10AG1Q8NH19 301 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 RNF185Q96GF1 192 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 TMEM70Q9BUB7 260 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 MSRB1Q9NZV6 116 aa11.05□□□□□ -0.64
PXN-208ENST00000538144 D6R8Y8 96 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 EREGO14944 169 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 SNAI2O43623 268 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 PRM2P04554 102 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 ORMDL3Q8N138 153 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 LINC01587Q99440 93 aa11.04□□□□□ -0.64
PXN-208ENST00000538144 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
PXN-208ENST00000538144 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms