RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SH2D1AO60880 128 aa8.17□□□□□ -1.1
CLIP1-210ENST00000538120 PLA2G2AP14555 144 aa8.17□□□□□ -1.1
CLIP1-210ENST00000538120 PSMB8P28062 276 aa8.17□□□□□ -1.1
CLIP1-210ENST00000538120 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-210ENST00000538120 ZNF575Q86XF7 245 aa8.17□□□□□ -1.1
CLIP1-210ENST00000538120 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
CLIP1-210ENST00000538120 APCP25054 2843 aa8.16□□□□□ -1.1
CLIP1-210ENST00000538120 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
CLIP1-210ENST00000538120 GPHB5Q86YW7 130 aa8.16□□□□□ -1.1
CLIP1-210ENST00000538120 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CLIP1-210ENST00000538120 PSMG3-AS1Q96PY0 264 aa8.16□□□□□ -1.1
CLIP1-210ENST00000538120 A0A0G2JLM5 398 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 H3BUT2 72 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 MRPL51Q4U2R6 128 aaKnown RBP8.15□□□□□ -1.1
CLIP1-210ENST00000538120 ZNF493Q6ZR52 646 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 PCP2Q8IVA1 136 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 RAB37Q96AX2 223 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 KMT2BQ9UMN6 2715 aaPredicted RBP8.15□□□□□ -1.1
CLIP1-210ENST00000538120 RBAKDNA6NC62 111 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 CT45A10P0DMU9 189 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 FAM104BQ5XKR9 115 aa8.15□□□□□ -1.1
CLIP1-210ENST00000538120 GAS8-AS1O95177 125 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 NPYP01303 97 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 UFSP1Q6NVU6 142 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 CHD6Q8TD26 2715 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
CLIP1-210ENST00000538120 C20orf173Q96LM9 149 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 NPFFR1Q9GZQ6 430 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 ZNF469Q96JG9 3925 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-210ENST00000538120 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 HOXA3O43365 443 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-210ENST00000538120 EDN2P20800 178 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 SEC11AP67812 179 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 ORMDL3Q8N138 153 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 DKK2Q9UBU2 259 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 U3KQK5 164 aa8.14□□□□□ -1.11
CLIP1-210ENST00000538120 PRRC2AP48634 2157 aaKnown RBP8.14□□□□□ -1.11
CLIP1-210ENST00000538120 SOCS3O14543 225 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 NMUP48645 174 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 RIPPLY3P57055 190 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 LGALS9BQ3B8N2 356 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 LGALS9CQ6DKI2 356 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 WFDC11Q8NEX6 87 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 TMEM89A2RUT3 159 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 C9orf118A6NHY6 69 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 ADAMTSL5Q6ZMM2 481 aa8.13□□□□□ -1.11
CLIP1-210ENST00000538120 IGHV7-4-1A0A0J9YVY3 117 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 J3QKU1 62 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 HBDP02042 147 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 TWIST1Q15672 202 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 TCTEX1D4Q5JR98 221 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 Q6AWC8 147 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 IL17RELQ6ZVW7 336 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 FER1L6-AS1Q8NA97 138 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 H3BRM9 83 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 CKS2P33552 79 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
CLIP1-210ENST00000538120 MXRA5Q9NR99 2828 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 CKS1BP61024 79 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 C9orf47Q6ZRZ4 202 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 RHPN1-AS1Q9BWJ2 59 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 A0A087WWL8 130 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 OR1N2Q8NGR9 330 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 MYOZ3Q8TDC0 251 aa8.11□□□□□ -1.11
CLIP1-210ENST00000538120 SPAG8Q99932 426 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-210ENST00000538120 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 A6NDN8 102 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 FABP5P3A8MUU1 101 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 K7EMT4 169 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 K7EP34 96 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 PTH2Q96A98 100 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 DAZ1Q9NQZ3 744 aaKnown RBP8.1□□□□□ -1.11
CLIP1-210ENST00000538120 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-210ENST00000538120 HSD52Q0P140 79 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
CLIP1-210ENST00000538120 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
CLIP1-210ENST00000538120 K7EMI3 77 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 EVI2AP22794 236 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 DEFB1P60022 68 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 TMEM78Q5T7P6 136 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 GTF2H5Q6ZYL4 71 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 OR2K2Q8NGT1 345 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 RS1O15537 224 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 ELANEP08246 267 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
CLIP1-210ENST00000538120 Q6ZQT7 251 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 Q8N2B8 174 aa8.09□□□□□ -1.11
CLIP1-210ENST00000538120 OR9G4Q8NGQ1 327 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms