RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 RNF151Q2KHN1 245 aa6.59□□□□□ -1.35
UBE3B-208ENST00000538070 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
UBE3B-208ENST00000538070 MRPS16Q9Y3D3 137 aaKnown RBP6.59□□□□□ -1.35
UBE3B-208ENST00000538070 GCSHP23434 173 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 C9orf47Q6ZRZ4 202 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 Q96MF0 132 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 SCRT2Q9NQ03 307 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 SMPXQ9UHP9 88 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 OVOL1O14753 267 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 ZFAND2AQ8N6M9 145 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 ZNF256Q9Y2P7 627 aaPredicted RBP6.58□□□□□ -1.36
UBE3B-208ENST00000538070 K7EP13 123 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 ID1P41134 155 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 ZC2HC1BQ5TFG8 222 aa6.58□□□□□ -1.36
UBE3B-208ENST00000538070 PPBPP02775 128 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 AMMECR1LQ6DCA0 310 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
UBE3B-208ENST00000538070 U3KQE9 123 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 IGHV4OR15-8A0A075B7B6 117 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 IGHV3OR16-12A0A075B7B8 117 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 A0A087WW49 117 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 CRXO43186 299 aaPredicted RBP6.57□□□□□ -1.36
UBE3B-208ENST00000538070 SLURP1P55000 103 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 DPF1Q92782 380 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 MS4A6AQ9H2W1 248 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 MRPL35Q9NZE8 188 aaKnown RBP6.57□□□□□ -1.36
UBE3B-208ENST00000538070 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 CCL25O15444 150 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 LAGE3Q14657 143 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 COX11Q9Y6N1 276 aa6.57□□□□□ -1.36
UBE3B-208ENST00000538070 ODF1Q14990 250 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 ZNF56Q15929 161 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 C12orf54Q6X4T0 127 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 U3KQK5 164 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 IGKV2D-26A0A0A0MRZ7 120 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 CD5LO43866 347 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 COX8AP10176 69 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 SCGB2A2Q13296 93 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
UBE3B-208ENST00000538070 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
UBE3B-208ENST00000538070 SLC25A16P16260 332 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
UBE3B-208ENST00000538070 Q8N8P6 123 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 CSTL1Q9H114 145 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 IGKCP01834 107 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 SRSF1Q07955 248 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBE3B-208ENST00000538070 MDFICQ9P1T7 246 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 H3BUT2 72 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 LGALS9BQ3B8N2 356 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 ZNF843Q8N446 348 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
UBE3B-208ENST00000538070 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.54□□□□□ -1.36
UBE3B-208ENST00000538070 DEFB131AP59861 70 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
UBE3B-208ENST00000538070 C19orf54Q5BKX5 351 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 TCTEX1D4Q5JR98 221 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 GATD1Q8NB37 220 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 FLNBO75369 2602 aaKnown RBP6.54□□□□□ -1.36
UBE3B-208ENST00000538070 DPM2O94777 84 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 SMIM2Q9BVW6 85 aa6.54□□□□□ -1.36
UBE3B-208ENST00000538070 MUC4Q99102 2169 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 K7ERJ3 54 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 PSMB8P28062 276 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 NRACQ8N912 160 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 OR11H1Q8NG94 326 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 RASL10AQ92737 203 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 VPREB3Q9UKI3 123 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 A6NJY4 79 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 DSCR9P59020 149 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 RPL39P62891 51 aaKnown RBP6.53□□□□□ -1.36
UBE3B-208ENST00000538070 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
UBE3B-208ENST00000538070 COX8CQ7Z4L0 72 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 DYNLRB2Q8TF09 96 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 MRPL53Q96EL3 112 aaKnown RBP6.53□□□□□ -1.36
UBE3B-208ENST00000538070 SOCS3O14543 225 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 IGHV4-31P0DP07 118 aa6.53□□□□□ -1.36
UBE3B-208ENST00000538070 RNASE3P12724 160 aaKnown RBP6.53□□□□□ -1.36
UBE3B-208ENST00000538070 IGHV3-64A0A075B6Q5 118 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 KLHL30-AS1Q8NEE0 82 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 WFDC11Q8NEX6 87 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 ATP5LO75964 103 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 Q8N1Y9 231 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 CLUHP3Q96NS8 147 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
UBE3B-208ENST00000538070 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
UBE3B-208ENST00000538070 MRPL52Q86TS9 123 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms