RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 PDE6DO43924 150 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 LTAP01374 205 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 BCL2P10415 239 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
LRRK1-211ENST00000538064 CRYBA4P53673 196 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 MEF2BQ02080 365 aaPredicted RBP10.26□□□□□ -0.77
LRRK1-211ENST00000538064 FHL2Q14192 279 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 COX8CQ7Z4L0 72 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 TMEM183AQ8IXX5 376 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 SPXQ9BT56 116 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
LRRK1-211ENST00000538064 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
LRRK1-211ENST00000538064 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
LRRK1-211ENST00000538064 GNRH2O43555 120 aa10.24□□□□□ -0.77
LRRK1-211ENST00000538064 TYMSP04818 313 aa10.24□□□□□ -0.77
LRRK1-211ENST00000538064 BAGE2Q86Y30 109 aa10.24□□□□□ -0.77
LRRK1-211ENST00000538064 RASL10AQ92737 203 aa10.24□□□□□ -0.77
LRRK1-211ENST00000538064 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
LRRK1-211ENST00000538064 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
LRRK1-211ENST00000538064 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
LRRK1-211ENST00000538064 MRPL23Q16540 153 aaKnown RBP10.23□□□□□ -0.77
LRRK1-211ENST00000538064 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
LRRK1-211ENST00000538064 LYPD6BQ8NI32 183 aa10.23□□□□□ -0.77
LRRK1-211ENST00000538064 ZC2HC1AQ96GY0 325 aa10.23□□□□□ -0.77
LRRK1-211ENST00000538064 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 TRGV4A0A0C4DH28 118 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 SIVA1O15304 175 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 NXPH4O95158 308 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 ORM1P02763 201 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 TEX261Q6UWH6 196 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 MED9Q9NWA0 146 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
LRRK1-211ENST00000538064 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 M0R2P5 195 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 SH2D1AO60880 128 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 S100A4P26447 101 aaKnown RBP10.21□□□□□ -0.77
LRRK1-211ENST00000538064 LINC00315P59091 139 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 ZNF674Q2M3X9 581 aa10.21□□□□□ -0.77
LRRK1-211ENST00000538064 B4DEV8 164 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 K7EQD1 137 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 CDK2AP2O75956 126 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 SRIP30626 198 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 ASIPP42127 132 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 CRIP1P50238 77 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 LYPD5Q6UWN5 251 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 NEGR1Q7Z3B1 354 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 SPATA12Q7Z6I5 190 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 NHLRC2Q8NBF2 726 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
LRRK1-211ENST00000538064 SMIM12Q96EX1 92 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 MLST8Q9BVC4 326 aa10.2□□□□□ -0.78
LRRK1-211ENST00000538064 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
LRRK1-211ENST00000538064 GNG4P50150 75 aa10.19□□□□□ -0.78
LRRK1-211ENST00000538064 CENPWQ5EE01 88 aa10.19□□□□□ -0.78
LRRK1-211ENST00000538064 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
LRRK1-211ENST00000538064 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
LRRK1-211ENST00000538064 DERL1Q9BUN8 251 aa10.19□□□□□ -0.78
LRRK1-211ENST00000538064 KRBOX1C9JBD0 128 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 C9JCJ5 164 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 M0R036 132 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 GYPEP15421 78 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 PRR27Q6MZM9 219 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 OR4C5Q8NGB2 326 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 EIF5A2Q9GZV4 153 aaKnown RBP10.18□□□□□ -0.78
LRRK1-211ENST00000538064 BIN3Q9NQY0 253 aa10.18□□□□□ -0.78
LRRK1-211ENST00000538064 TMEM250H0YL14 139 aa10.17□□□□□ -0.78
LRRK1-211ENST00000538064 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
LRRK1-211ENST00000538064 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
LRRK1-211ENST00000538064 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
LRRK1-211ENST00000538064 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
LRRK1-211ENST00000538064 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
LRRK1-211ENST00000538064 NDUFS6O75380 124 aaKnown RBP10.16□□□□□ -0.78
LRRK1-211ENST00000538064 MGST1P10620 155 aaKnown RBP10.16□□□□□ -0.78
LRRK1-211ENST00000538064 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
LRRK1-211ENST00000538064 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
LRRK1-211ENST00000538064 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
LRRK1-211ENST00000538064 ZNF876PQ49A33 203 aa10.16□□□□□ -0.78
LRRK1-211ENST00000538064 PTH2Q96A98 100 aa10.16□□□□□ -0.78
LRRK1-211ENST00000538064 DAZAP1Q96EP5 407 aaKnown RBP10.16□□□□□ -0.78
LRRK1-211ENST00000538064 LY96Q9Y6Y9 160 aa10.16□□□□□ -0.78
LRRK1-211ENST00000538064 TMSB15BA0A087X1C1 80 aa10.15□□□□□ -0.78
LRRK1-211ENST00000538064 DNLZQ5SXM8 178 aa10.15□□□□□ -0.78
LRRK1-211ENST00000538064 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
LRRK1-211ENST00000538064 GRIFINA4D1Z8 144 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 H3BVH4 76 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 K7EP13 123 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 CIDEAO60543 219 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 CXCL1P09341 107 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 DNAH10OSP0CZ25 163 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 SH2D6Q7Z4S9 175 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 WFDC10BQ8IUB3 73 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 SYT8Q8NBV8 401 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 PARLQ9H300 379 aa10.14□□□□□ -0.79
LRRK1-211ENST00000538064 TRAV9-2A0A087WT02 112 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms