RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 K7ERU9 68 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 TRBV7-9A0A0J9YWB2 115 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 MSMBP08118 114 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 FABP2P12104 132 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 SLC25A16P16260 332 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
USP44-203ENST00000537435 NHP2Q9NX24 153 aaKnown RBP10.78□□□□□ -0.68
USP44-203ENST00000537435 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
USP44-203ENST00000537435 SAP30O75446 220 aa10.77□□□□□ -0.69
USP44-203ENST00000537435 K7EMI3 77 aa10.77□□□□□ -0.69
USP44-203ENST00000537435 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
USP44-203ENST00000537435 NEXN-AS1Q8NBZ9 246 aa10.77□□□□□ -0.69
USP44-203ENST00000537435 OR5A1Q8NGJ0 315 aa10.77□□□□□ -0.69
USP44-203ENST00000537435 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
USP44-203ENST00000537435 AVPP01185 164 aa10.76□□□□□ -0.69
USP44-203ENST00000537435 CFHR3Q02985 330 aa10.76□□□□□ -0.69
USP44-203ENST00000537435 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
USP44-203ENST00000537435 KLLNB2CW77 178 aa10.75□□□□□ -0.69
USP44-203ENST00000537435 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
USP44-203ENST00000537435 BAALCQ8WXS3 180 aa10.75□□□□□ -0.69
USP44-203ENST00000537435 CSTL1Q9H114 145 aa10.75□□□□□ -0.69
USP44-203ENST00000537435 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
USP44-203ENST00000537435 NXPH4O95158 308 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 PPP1R17O96001 155 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 TAL2Q16559 108 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 FAM159AQ6UWV7 190 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 ITPR1Q14643 2758 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 K7EMT4 169 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 ID1P41134 155 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 LINC00315P59091 139 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 DCANP1Q8TF63 244 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 KIF25-AS1Q9Y6Z4 181 aa10.74□□□□□ -0.69
USP44-203ENST00000537435 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
USP44-203ENST00000537435 JPT2Q9H910 190 aa10.73□□□□□ -0.69
USP44-203ENST00000537435 MYMXA0A1B0GTQ4 84 aa10.73□□□□□ -0.69
USP44-203ENST00000537435 PRSS29PA6NIE9 313 aa10.73□□□□□ -0.69
USP44-203ENST00000537435 COL12A1Q99715 3063 aa10.72□□□□□ -0.69
USP44-203ENST00000537435 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
USP44-203ENST00000537435 B4DSR2 109 aa10.72□□□□□ -0.69
USP44-203ENST00000537435 DUSP14O95147 198 aaKnown RBP10.71□□□□□ -0.69
USP44-203ENST00000537435 CD7P09564 240 aa10.71□□□□□ -0.69
USP44-203ENST00000537435 PSMB8P28062 276 aa10.71□□□□□ -0.69
USP44-203ENST00000537435 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
USP44-203ENST00000537435 MUC4Q99102 2169 aa10.71□□□□□ -0.7
USP44-203ENST00000537435 SPG11Q96JI7 2443 aa10.71□□□□□ -0.7
USP44-203ENST00000537435 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 IGHV4OR15-8A0A075B7B6 117 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 A0A087WW49 117 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 A0A087WWL8 130 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 C12orf74Q32Q52 190 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 C10orf99Q6UWK7 81 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 IGLL5B9A064 214 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 E9PLD3 99 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 SUMO4Q6EEV6 95 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 CYSLTR1Q9Y271 337 aa10.7□□□□□ -0.7
USP44-203ENST00000537435 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP44-203ENST00000537435 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 ZNF688P0C7X2 276 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 PRADC1Q9BSG0 188 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 F5H697 171 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 G3V4G9 280 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
USP44-203ENST00000537435 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
USP44-203ENST00000537435 TP53TG1Q9Y2A0 90 aa10.69□□□□□ -0.7
USP44-203ENST00000537435 LINC01619G3V211 115 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 CRYGDP07320 174 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 RPL32P62910 135 aaKnown RBP10.68□□□□□ -0.7
USP44-203ENST00000537435 DEFB112Q30KQ8 113 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 ZNF479Q96JC4 524 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 ZNF580Q9UK33 172 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 TSHBP01222 138 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 NRGNQ92686 78 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 AGRNO00468 2067 aa10.68□□□□□ -0.7
USP44-203ENST00000537435 TRAV12-2A0A075B6T6 113 aa10.67□□□□□ -0.7
USP44-203ENST00000537435 SCGB2A2Q13296 93 aa10.67□□□□□ -0.7
USP44-203ENST00000537435 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 VCYO14598 125 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 GATA3P23771 443 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 RPL39P62891 51 aaKnown RBP10.66□□□□□ -0.7
USP44-203ENST00000537435 FAM74A4Q5TZK3 123 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 KIR2DL4Q99706 377 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 CSPG4Q6UVK1 2322 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 A0A0J9YX75 114 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 EMP1P54849 157 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 COTL1Q14019 142 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
USP44-203ENST00000537435 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms