RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
SYNE1-235ENST00000537033 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
SYNE1-235ENST00000537033 S100A4P26447 101 aaKnown RBP9.37□□□□□ -0.91
SYNE1-235ENST00000537033 LELP1Q5T871 98 aa9.37□□□□□ -0.91
SYNE1-235ENST00000537033 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-235ENST00000537033 PTH2Q96A98 100 aa9.37□□□□□ -0.91
SYNE1-235ENST00000537033 Q9HAA7 133 aa9.37□□□□□ -0.91
SYNE1-235ENST00000537033 BORCS7-ASMTA0A0B4J1R7 106 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 XGP55808 180 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 Q5VSD8 79 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 DPPA3Q6W0C5 159 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
SYNE1-235ENST00000537033 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 A8MWV9 139 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 IFNA7P01567 189 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 IGHV3-30P01768 117 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 IGHV3-33P01772 117 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-235ENST00000537033 INAFM2P0DMQ5 153 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 IGHV3-30-3P0DP02 117 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 IGHV3-30-5P0DP03 117 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
SYNE1-235ENST00000537033 ASIPP42127 132 aa9.35□□□□□ -0.91
SYNE1-235ENST00000537033 hCG_2014768A0A024R1R8 64 aa9.34□□□□□ -0.91
SYNE1-235ENST00000537033 LAGE3Q14657 143 aa9.34□□□□□ -0.91
SYNE1-235ENST00000537033 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
SYNE1-235ENST00000537033 ZFP2Q6ZN57 461 aa9.34□□□□□ -0.91
SYNE1-235ENST00000537033 TM2D2Q9BX73 214 aa9.34□□□□□ -0.91
SYNE1-235ENST00000537033 ARL2-SNX15V9GYD0 113 aa9.34□□□□□ -0.91
SYNE1-235ENST00000537033 FXYD6-FXYD2A0A087WZ82 144 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 TRAV34A0A0B4J273 112 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 RPL7L1Q6DKI1 246 aaKnown RBP9.33□□□□□ -0.92
SYNE1-235ENST00000537033 Q8N814 137 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-235ENST00000537033 PARLQ9H300 379 aa9.33□□□□□ -0.92
SYNE1-235ENST00000537033 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 GAGE12JA6NER3 117 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 PEX7O00628 323 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 UBE2G2P60604 165 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 GAGE1Q13065 139 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 GAGE4Q13068 117 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 GAGE5Q13069 117 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 GAGE13Q4V321 117 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 Q86TA4 180 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 SYT8Q8NBV8 401 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 HIST1H2BAQ96A08 127 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 LINC00479Q96M42 142 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 TMEM70Q9BUB7 260 aa9.32□□□□□ -0.92
SYNE1-235ENST00000537033 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 RNF222A6NCQ9 220 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 B4DEV8 164 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 RHODO00212 210 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 FGF8P55075 233 aaPredicted RBP9.31□□□□□ -0.92
SYNE1-235ENST00000537033 Q5BKY6 102 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 TOR2AQ5JU69 321 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 IL36BQ9NZH7 164 aa9.31□□□□□ -0.92
SYNE1-235ENST00000537033 A0A087WWC5 75 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 TRAV8-3A0A0A6YYJ7 113 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 H3BVH4 76 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-235ENST00000537033 UBE2G1P62253 170 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 OR2T35Q8NGX2 323 aa9.3□□□□□ -0.92
SYNE1-235ENST00000537033 FAM74A7A6NL05 159 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 M0R036 132 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 PFDN1O60925 122 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 Q6ZSN1 163 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 FMC1Q96HJ9 113 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
SYNE1-235ENST00000537033 MAP1LC3B2A6NCE7 125 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 HAMPP81172 84 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 FAM162BQ5T6X4 162 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 ZC2HC1AQ96GY0 325 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 MAP1LC3BQ9GZQ8 125 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
SYNE1-235ENST00000537033 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 SH2D1AO60880 128 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 ARMS2P0C7Q2 107 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 SEC11BP0C7V7 166 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 TPT1P13693 172 aaKnown RBP9.27□□□□□ -0.93
SYNE1-235ENST00000537033 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 DMRTA1Q5VZB9 504 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 Q8N3U1 123 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 STOML3Q8TAV4 291 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 RMI2Q96E14 147 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 TCEAL7Q9BRU2 100 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 JPT2Q9H910 190 aa9.27□□□□□ -0.93
SYNE1-235ENST00000537033 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms