RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RP1L1Q8IWN7 2480 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 NACAE9PAV3 2078 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3OR16-8A0A075B7F1 116 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 A0A087WVE0 104 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 IGKV2-40A0A087WW87 121 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 PIGBOS1A0A0B4J2F0 54 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 IGKV2D-40P01614 121 aaPredicted RBP2.86□□□□□ -1.95
MCF2-210ENST00000536274 RFPL3SP0C7P2 107 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 CDSNQ15517 529 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 TAL2Q16559 108 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 ZNRF1Q8ND25 227 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 MDS2Q8NDY4 140 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 RNF138Q8WVD3 245 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 ZNF580Q9UK33 172 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 APC2O95996 2303 aa2.86□□□□□ -1.95
MCF2-210ENST00000536274 OOEPA6NGQ2 149 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 F8WDY8 70 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 SAA2P0DJI9 122 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 EGR2P11161 476 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 HLA-DMBP28068 263 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 LOXP28300 417 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 LYZP61626 148 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 Q6ZS92 163 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 RNF182Q8N6D2 247 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 TMEM14BQ9NUH8 114 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 U3KQK5 164 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 A0A1W2PRX2 142 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 J3QT63 122 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 GP9P14770 177 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 WT1P19544 449 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 MAGEA5P43359 124 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 WT1-ASQ06250 92 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 EBI3Q14213 229 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 RHOHQ15669 191 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 TEX36Q5VZQ5 186 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 DTX2Q86UW9 622 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 CD177Q8N6Q3 437 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 Q8N8P6 123 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 NFAM1Q8NET5 270 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 LINC00526Q96FQ7 95 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 MRPL20Q9BYC9 149 aaKnown RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 TRAV8-3A0A0A6YYJ7 113 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 TRGV8A0A0C4DH27 118 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 C15orf65H3BRN8 121 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 H7C423 109 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 UQCRQO14949 82 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 ORM1P02763 201 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 NDPQ00604 133 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 Q6ZT83 130 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 TMEM219Q86XT9 240 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 KLF14Q8TD94 323 aaPredicted RBP2.85□□□□□ -1.95
MCF2-210ENST00000536274 PRR25Q96S07 402 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 ROS1P08922 2347 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 DSCAMO60469 2012 aa2.85□□□□□ -1.95
MCF2-210ENST00000536274 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 A0A0J9YY99 117 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 CGB1A6NKQ9 187 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 TRIAP1O43715 76 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3-30P01768 117 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3-33P01772 117 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 SAA1P0DJI8 122 aaPredicted RBP2.84□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3-30-5P0DP03 117 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 DLX1P56177 255 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 SDIM1Q6ZPB5 146 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 ZNF575Q86XF7 245 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 LINC01561Q8N1V8 128 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3-72A0A0B4J1Y9 119 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 TRAV17A0A0B4J275 112 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 IGKV3D-7A0A0C4DH55 119 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 TRACP01848 142 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 PRSS2P07478 247 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 LYRM7Q5U5X0 104 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 FOXA2Q9Y261 457 aaPredicted RBP2.84□□□□□ -1.95
MCF2-210ENST00000536274 ACACAQ13085 2346 aa2.84□□□□□ -1.95
MCF2-210ENST00000536274 TRGV5A0A0B4J1U4 118 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 COX7CP15954 63 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 PFN2P35080 140 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 TNFAIP6P98066 277 aaPredicted RBP2.84□□□□□ -1.96
MCF2-210ENST00000536274 PRCDQ00LT1 54 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 MSMPQ1L6U9 139 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 LINC00596Q86U02 117 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 MUSTN1Q8IVN3 82 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 FAM223AQ8IWN6 122 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 Q8NA96 180 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 ZNF71Q9NQZ8 489 aaPredicted RBP2.84□□□□□ -1.96
MCF2-210ENST00000536274 U3KQE9 123 aa2.84□□□□□ -1.96
MCF2-210ENST00000536274 IGLV2-18A0A075B6J9 118 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 A0A1B0GX51 115 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 C11orf86A6NJI1 115 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 F8VRH5 84 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 COX6B1P14854 86 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 UBE2E1P51965 193 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 ZCCHC24Q8N2G6 241 aaKnown RBP2.83□□□□□ -1.96
MCF2-210ENST00000536274 LINC00311Q8N616 119 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 LINC00482Q8N8I6 264 aa2.83□□□□□ -1.96
MCF2-210ENST00000536274 ZNF714Q96N38 554 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms