RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 SIVA1O15304 175 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ELANEP08246 267 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
VPS33B-202ENST00000535906 SEC11AP67812 179 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ODF1Q14990 250 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
VPS33B-202ENST00000535906 ID1P41134 155 aa10.03□□□□□ -0.8
VPS33B-202ENST00000535906 PSMG4Q5JS54 123 aa10.03□□□□□ -0.8
VPS33B-202ENST00000535906 CHD6Q8TD26 2715 aa10.03□□□□□ -0.8
VPS33B-202ENST00000535906 WFDC12Q8WWY7 111 aa10.03□□□□□ -0.8
VPS33B-202ENST00000535906 UBE2E2Q96LR5 201 aa10.03□□□□□ -0.8
VPS33B-202ENST00000535906 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 CBY3A6NI87 242 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 GNRH2O43555 120 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 PRSS1P07477 247 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 HIST2H2BCQ6DN03 193 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 ERASQ7Z444 233 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 OR4C5Q8NGB2 326 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 M0R381 172 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 ZNF688P0C7X2 276 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 S100A4P26447 101 aaKnown RBP10.02□□□□□ -0.81
VPS33B-202ENST00000535906 HOXD3P31249 432 aaPredicted RBP10.02□□□□□ -0.81
VPS33B-202ENST00000535906 NMUP48645 174 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 TCTAP57738 103 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 LAGE3Q14657 143 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
VPS33B-202ENST00000535906 MYO9AB2RTY4 2548 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 KLLNB2CW77 178 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 ATP5LO75964 103 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 SMIM17P0DL12 118 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 ASIPP42127 132 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 RNF152Q8N8N0 203 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 HSD52Q0P140 79 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 SAMD13Q5VXD3 122 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 WFDC11Q8NEX6 87 aa10.01□□□□□ -0.81
VPS33B-202ENST00000535906 SORL1Q92673 2214 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 C7orf71A4D174 169 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 K7EP13 123 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 LGALS9O00182 355 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 IGKCP01834 107 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 RNASE3P12724 160 aaKnown RBP10□□□□□ -0.81
VPS33B-202ENST00000535906 FOXC2Q99958 501 aa10□□□□□ -0.81
VPS33B-202ENST00000535906 SONP18583 2426 aaKnown RBP10□□□□□ -0.81
VPS33B-202ENST00000535906 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 Q8N2B8 174 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 PHLDA3Q9Y5J5 127 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 CCDC168Q8NDH2 2452 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 K7EQG2 157 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 AGRNO00468 2067 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 MUC4Q99102 2169 aa9.99□□□□□ -0.81
VPS33B-202ENST00000535906 A6NDN8 102 aa9.98□□□□□ -0.81
VPS33B-202ENST00000535906 DPM2O94777 84 aa9.98□□□□□ -0.81
VPS33B-202ENST00000535906 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
VPS33B-202ENST00000535906 CUBNO60494 3623 aa9.98□□□□□ -0.81
VPS33B-202ENST00000535906 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
VPS33B-202ENST00000535906 C14orf178Q8N769 122 aaPredicted RBP9.98□□□□□ -0.81
VPS33B-202ENST00000535906 FLNAP21333 2647 aaKnown RBP9.97□□□□□ -0.81
VPS33B-202ENST00000535906 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 TRAV8-6A0A0B4J262 113 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 A0A0J9YX75 114 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 IGKV3-20P01619 116 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 SMIM2Q9BVW6 85 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 H3BRM9 83 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 SLURP1P55000 103 aa9.97□□□□□ -0.81
VPS33B-202ENST00000535906 FAM159AQ6UWV7 190 aa9.96□□□□□ -0.81
VPS33B-202ENST00000535906 NF1P21359 2839 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 TCTEX1D4Q5JR98 221 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
VPS33B-202ENST00000535906 RASL10AQ92737 203 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 HIGD1BQ9P298 99 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
VPS33B-202ENST00000535906 PDZD2O15018 2839 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 TRAV12-2A0A075B6T6 113 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 A0A087WX48 190 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 SUMO2P61956 95 aaKnown RBP9.95□□□□□ -0.82
VPS33B-202ENST00000535906 HIST2H2BDQ6DRA6 164 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
VPS33B-202ENST00000535906 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 HLA-DRB4P13762 266 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 ORMDL2Q53FV1 153 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 DUX3Q96PT4 197 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 TMEM160Q9NX00 188 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 HLA-DRB4X5D2U9 266 aa9.95□□□□□ -0.82
VPS33B-202ENST00000535906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.94□□□□□ -0.82
VPS33B-202ENST00000535906 K7EMI3 77 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 CD7P09564 240 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 GTSCR1Q86UQ5 136 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 RPL39LQ96EH5 51 aaKnown RBP9.94□□□□□ -0.82
VPS33B-202ENST00000535906 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 NXPH4O95158 308 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms