RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 PPT1P50897 306 aa12.68□□□□□ -0.38
NDUFS3-213ENST00000534716 LINC00479Q96M42 142 aa12.68□□□□□ -0.38
NDUFS3-213ENST00000534716 NKX6-2Q9C056 277 aaPredicted RBP12.68□□□□□ -0.38
NDUFS3-213ENST00000534716 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
NDUFS3-213ENST00000534716 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
NDUFS3-213ENST00000534716 ZFP2Q6ZN57 461 aa12.67□□□□□ -0.38
NDUFS3-213ENST00000534716 OR2T35Q8NGX2 323 aa12.67□□□□□ -0.38
NDUFS3-213ENST00000534716 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 FABP5P3A8MUU1 101 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 IBA57-AS1B1ANH7 110 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 LELP1Q5T871 98 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 COX8CQ7Z4L0 72 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 ARL2-SNX15V9GYD0 113 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 FAT1Q14517 4588 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 VPS13BQ7Z7G8 4022 aa12.66□□□□□ -0.38
NDUFS3-213ENST00000534716 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 FAM74A7A6NL05 159 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 A8MWV9 139 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 G3V3Q6 166 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 IFNA7P01567 189 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 FUSP35637 526 aaKnown RBP eCLIP12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
NDUFS3-213ENST00000534716 IGHV3-73A0A0B4J1V6 119 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 PEX7O00628 323 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 XGP55808 180 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 Q86TA4 180 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
NDUFS3-213ENST00000534716 LRCOL1A6NCL2 159 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 LINC00694P0DN24 101 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 S100A4P26447 101 aaKnown RBP12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 ASIPP42127 132 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 UBE2G2P60604 165 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 UFSP1Q6NVU6 142 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 PARLQ9H300 379 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 CYTL1Q9NRR1 136 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 ZFP30Q9Y2G7 519 aa12.63□□□□□ -0.39
NDUFS3-213ENST00000534716 KRTAP10-1P60331 282 aa12.62□□□□□ -0.39
NDUFS3-213ENST00000534716 Q6ZSN1 163 aa12.62□□□□□ -0.39
NDUFS3-213ENST00000534716 TCEAL7Q9BRU2 100 aa12.62□□□□□ -0.39
NDUFS3-213ENST00000534716 CRIP1P50238 77 aa12.61□□□□□ -0.39
NDUFS3-213ENST00000534716 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
NDUFS3-213ENST00000534716 LAGE3Q14657 143 aa12.61□□□□□ -0.39
NDUFS3-213ENST00000534716 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 B4DEV8 164 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 KRBOX1C9JBD0 128 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 GCSHP23434 173 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 FHITP49789 147 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 RGS21Q2M5E4 152 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 LGALSLQ3ZCW2 172 aaPredicted RBP12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 NTN5Q8WTR8 489 aaPredicted RBP12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 ZC2HC1AQ96GY0 325 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
NDUFS3-213ENST00000534716 HERC1Q15751 4861 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 MAP1LC3B2A6NCE7 125 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 PSCAO43653 123 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 DMRTA1Q5VZB9 504 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
NDUFS3-213ENST00000534716 ARPC5O15511 151 aa12.58□□□□□ -0.4
NDUFS3-213ENST00000534716 FAM162BQ5T6X4 162 aa12.58□□□□□ -0.4
NDUFS3-213ENST00000534716 SH2D1AO60880 128 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 IGHV3-30P01768 117 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 IGHV3-30-3P0DP02 117 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 IGHV3-30-5P0DP03 117 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 ZNF674Q2M3X9 581 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 JPT2Q9H910 190 aa12.57□□□□□ -0.4
NDUFS3-213ENST00000534716 GAGE12JA6NER3 117 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 H3BVH4 76 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 RHODO00212 210 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 LTAP01374 205 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 GAGE1Q13065 139 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 GAGE4Q13068 117 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 GAGE5Q13069 117 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 GAGE13Q4V321 117 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 Q8N814 137 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 Q9UF83 564 aa12.56□□□□□ -0.4
NDUFS3-213ENST00000534716 A0A087WWC5 75 aa12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 UBE2G1P62253 170 aa12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 ZNF345Q14585 488 aa12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 C14orf178Q8N769 122 aaPredicted RBP12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 Q9HAA7 133 aa12.55□□□□□ -0.4
NDUFS3-213ENST00000534716 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
NDUFS3-213ENST00000534716 M0R036 132 aa12.54□□□□□ -0.4
NDUFS3-213ENST00000534716 KCNRGQ8N5I3 272 aa12.54□□□□□ -0.4
NDUFS3-213ENST00000534716 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
NDUFS3-213ENST00000534716 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
NDUFS3-213ENST00000534716 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms