RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 LSM5Q9Y4Y9 91 aaKnown RBP2.32□□□□□ -2.04
USP48-215ENST00000534705 PKD1L1Q8TDX9 2849 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 LOC102724200A0A096LPH7 203 aaPredicted RBP2.31□□□□□ -2.04
USP48-215ENST00000534705 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 A0A0G2JRQ6 117 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 C5orf49A4QMS7 147 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 CEBPZOSA8MTT3 80 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 J3QR89 54 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SOCS1O15524 211 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 PLXNB1O43157 2135 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SYNGR1O43759 233 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 FOXH1O75593 365 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 OR7C1O76099 320 aaPredicted RBP2.31□□□□□ -2.04
USP48-215ENST00000534705 IGLV3-1P01715 115 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 P01737 135 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 IGHV1-46P01743 117 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 HLA-DQA1P01909 254 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SLC25A16P16260 332 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 CBLN1P23435 193 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SRIP30626 198 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 PSMB3P49720 205 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 UBE2E1P51965 193 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 DLX6P56179 175 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 KRTDAPP60985 99 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 PCBD1P61457 104 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 UBE2G1P62253 170 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 GRB2P62993 217 aaKnown RBP2.31□□□□□ -2.04
USP48-215ENST00000534705 CCL8P80075 99 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 LCN12Q6JVE5 192 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 Q6P435 159 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 TCF23Q7RTU1 214 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 BAGE3Q86Y29 109 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 BAGE2Q86Y30 109 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SBSPONQ8IVN8 264 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 C6orf223Q8N319 242 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 C14orf178Q8N769 122 aaPredicted RBP2.31□□□□□ -2.04
USP48-215ENST00000534705 ZNF645Q8N7E2 425 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 OR5D14Q8NGL3 314 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 OR10AG1Q8NH19 301 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 OR1L1Q8NH94 360 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 UBE2E2Q96LR5 201 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 C18orf15Q96N68 181 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 GGTLC1Q9BX51 225 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 MRPL32Q9BYC8 188 aaKnown RBP2.31□□□□□ -2.04
USP48-215ENST00000534705 SAMD10Q9BYL1 202 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 TMEM222Q9H0R3 208 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 OSTCQ9NRP0 149 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 KCNIP2Q9NS61 270 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 HIGD1BQ9P298 99 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SS18L2Q9UHA2 77 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 RABAC1Q9UI14 185 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 HSPB8Q9UJY1 196 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 CYSLTR1Q9Y271 337 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 ZNF257Q9Y2Q1 563 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 SIGLEC9Q9Y336 463 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 WASHC3Q9Y3C0 194 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 UFC1Q9Y3C8 167 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 R4GMQ9 66 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 ARL2-SNX15V9GYD0 113 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 V9GYV3 84 aa2.31□□□□□ -2.04
USP48-215ENST00000534705 IGHV3OR16-9A0A0B4J2B5 98 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 A0A1B0GV50 99 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 LOC107986453A0A1B0GWG9 222 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SMIM27A0A1W2PRY6 76 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 IQCF6A8MYZ5 107 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 F5H5K5 113 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SYS1-DBNDD2H3BUS1 97 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 NAPSAO96009 420 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 IGHV3-23P01764 117 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 IGHV3-7P01780 117 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 APCSP02743 223 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 BLVRBP30043 206 aaPredicted RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 TCL1AP56279 114 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 RPS28P62857 69 aaKnown RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 GNG3P63215 75 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 MEF2CQ06413 473 aaPredicted RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 PRR4Q16378 134 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 FAM162BQ5T6X4 162 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 Q6AWC8 147 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 TMEM14EPQ6UXP3 125 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 Q6ZUT4 128 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 MOB1BQ7L9L4 216 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SMIM20Q8N5G0 67 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 OR4X2Q8NGF9 303 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 LRRC29Q8WV35 223 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 RTN4IP1Q8WWV3 396 aaPredicted RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 H1FXQ92522 213 aaKnown RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 RDH5Q92781 318 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 TMEM70Q9BUB7 260 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 FGF23Q9GZV9 251 aaPredicted RBP2.3□□□□□ -2.04
USP48-215ENST00000534705 TMEM126AQ9H061 195 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 ZNF286AQ9HBT8 521 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 DYNLRB1Q9NP97 96 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms