RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
NEDD8-MDP1-202ENST00000534348 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
NEDD8-MDP1-202ENST00000534348 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 SFT2D2O95562 160 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 BAXQ07812 192 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 PPP1R1AQ13522 171 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FAM74A4Q5TZK3 123 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 OR10G7Q8NGN6 311 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 SMIM4Q8WVI0 70 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TVP23CQ96ET8 276 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 C9orf85Q96MD7 179 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 CHCHD5Q9BSY4 110 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GGACTQ9BVM4 153 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 NMES1Q9C002 83 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TREM1Q9NP99 234 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RABL2AQ9UBK7 228 aaPredicted RBP6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RAB26Q9ULW5 256 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 LENEPQ9Y5L5 61 aa6.21□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 A0A096LNI7 61 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FAM24AA6NFZ4 105 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 A8MWV9 139 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RGS5O15539 181 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RPL29P47914 159 aaKnown RBP6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 SRSF3P84103 164 aaKnown RBP6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FAM167A-AS1Q96KT0 104 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 VCX3BQ9H321 246 aa6.2□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UBE2L5PA0A1B0GUS4 154 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 KRTAP9-7A8MTY7 169 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 CST7O76096 145 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 PTTG1O95997 202 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 BCAP31P51572 246 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 MRPS10P82664 201 aaKnown RBP6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 IL18Q14116 193 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 INO80EQ8NBZ0 244 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 AP3S1Q92572 193 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 SGK494Q96LW2 274 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 MIXL1Q9H2W2 232 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GSKIPQ9P0R6 139 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 WDR83OSQ9Y284 106 aa6.19□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 C7orf66A4D0T2 115 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TSPAN13O95857 204 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RPS10P46783 165 aaKnown RBP6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 ZNF80P51504 273 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GAGE6Q13070 117 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UFSP1Q6NVU6 142 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GOLT1AQ6ZVE7 132 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 MCFD2Q8NI22 146 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GFRA4Q9GZZ7 299 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 PRR34Q9NV39 138 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UQCC1Q9NVA1 299 aa6.18□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 OR7C2O60412 319 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FGF7P21781 194 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 S100A10P60903 97 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UBE2D3P61077 147 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UBE2D2P62837 147 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RBX1P62877 108 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RPL36AP83881 106 aaKnown RBP6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 HIGD2BQ4VC39 106 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 PTH2Q96A98 100 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 DIRAS2Q96HU8 199 aa6.17□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 L7N2F9 121 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 CTDSP2O14595 271 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 S100A4P26447 101 aaKnown RBP6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 LINC01547P58512 204 aaPredicted RBP6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TAS2R30P59541 319 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 VAMP2P63027 116 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 REG3AQ06141 175 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 CMTM2Q8TAZ6 248 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TMED6Q8WW62 240 aa6.16□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 TRBV7-3A0A075B6L6 115 aa6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 GCGP01275 180 aa6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 MT-ND6P03923 174 aa6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 UBE2L3P68036 154 aaKnown RBP6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 IAH1Q2TAA2 248 aaPredicted RBP6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 C1orf137Q5JT78 98 aa6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 FUNDC2Q9BWH2 189 aa6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 SLIRPQ9GZT3 109 aaKnown RBP6.15□□□□□ -1.42
NEDD8-MDP1-202ENST00000534348 EIF3GO75821 320 aaKnown RBP eCLIP6.14□□□□□ -1.431e-7■■■■□ 19.4
NEDD8-MDP1-202ENST00000534348 GNG5P63218 68 aa6.14□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 CTF1Q16619 201 aa6.14□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 SPANXN2Q5MJ10 180 aa6.14□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 C15orf56Q8N910 161 aa6.14□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 C9orf170A2RU37 121 aa6.13□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 RHODO00212 210 aa6.13□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 MBPP02686 304 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 FER1L6-AS1Q8NA97 138 aa6.13□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 UBE2D1P51668 147 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 PKIAP61925 76 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 NTM-AS1Q6ZSK4 140 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 SUN5Q8TC36 379 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 NDFIP1Q9BT67 221 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 NPCDR1Q9BY65 106 aa6.12□□□□□ -1.43
NEDD8-MDP1-202ENST00000534348 Q9H521 79 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms