RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 GOLT1BQ9Y3E0 138 aa11.57□□□□□ -0.56
TRIM3-213ENST00000533309 TIMM8BQ9Y5J9 83 aaPredicted RBP11.57□□□□□ -0.56
TRIM3-213ENST00000533309 NTF3P20783 257 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 CAMPP49913 170 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 APOC4P55056 127 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 SSTP61278 116 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 C11orf72Q8NBR9 251 aa11.56□□□□□ -0.56
TRIM3-213ENST00000533309 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
TRIM3-213ENST00000533309 AZU1P20160 251 aa11.55□□□□□ -0.56
TRIM3-213ENST00000533309 RIGQ13278 110 aa11.55□□□□□ -0.56
TRIM3-213ENST00000533309 BORCS7Q96B45 105 aa11.55□□□□□ -0.56
TRIM3-213ENST00000533309 SNURFLB1AK76 121 aa11.54□□□□□ -0.56
TRIM3-213ENST00000533309 NXPH4O95158 308 aa11.54□□□□□ -0.56
TRIM3-213ENST00000533309 WDR73Q6P4I2 378 aa11.54□□□□□ -0.56
TRIM3-213ENST00000533309 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
TRIM3-213ENST00000533309 GNB1LQ9BYB4 327 aa11.54□□□□□ -0.56
TRIM3-213ENST00000533309 A0A1B0GW15 77 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 PHOX2AO14813 284 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 TRGC2P03986 189 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 CACNG7P62955 275 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 COX19Q49B96 90 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 RNASE8Q8TDE3 154 aaKnown RBP11.53□□□□□ -0.56
TRIM3-213ENST00000533309 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 M0R381 172 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
TRIM3-213ENST00000533309 RAB4BP61018 213 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 ZNF415Q09FC8 603 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 TWIST1Q15672 202 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 DEFB135Q30KP9 77 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 SPANXN1Q5VSR9 72 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 GSN-AS1Q9NRJ2 163 aa11.53□□□□□ -0.56
TRIM3-213ENST00000533309 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 MT-ND6P03923 174 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 DMRTA1Q5VZB9 504 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 ZNF493Q6ZR52 646 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 IL17DQ8TAD2 202 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.57
TRIM3-213ENST00000533309 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
TRIM3-213ENST00000533309 UBE2CO00762 179 aa11.51□□□□□ -0.57
TRIM3-213ENST00000533309 SLAQ13239 276 aa11.51□□□□□ -0.57
TRIM3-213ENST00000533309 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
TRIM3-213ENST00000533309 TRAPPC1Q9Y5R8 145 aa11.51□□□□□ -0.57
TRIM3-213ENST00000533309 X6R8D5 127 aa11.51□□□□□ -0.57
TRIM3-213ENST00000533309 PLAC8L1A1L4L8 177 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 K7EIL1 84 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 S100A8P05109 93 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 FABP9Q0Z7S8 132 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 ZFP82Q8N141 532 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 TENM3Q9P273 2699 aa11.5□□□□□ -0.57
TRIM3-213ENST00000533309 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 Q6ZWC4 215 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 FRZBQ92765 325 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 TMEM191AQ9H0A3 160 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 EVI2AP22794 236 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 C16orf74Q96GX8 76 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
TRIM3-213ENST00000533309 ZNF876PQ49A33 203 aa11.48□□□□□ -0.57
TRIM3-213ENST00000533309 RNF183Q96D59 192 aa11.48□□□□□ -0.57
TRIM3-213ENST00000533309 SPXQ9BT56 116 aa11.48□□□□□ -0.57
TRIM3-213ENST00000533309 M0R2P5 195 aa11.47□□□□□ -0.57
TRIM3-213ENST00000533309 APCSP02743 223 aa11.47□□□□□ -0.57
TRIM3-213ENST00000533309 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
TRIM3-213ENST00000533309 AMN1Q8IY45 258 aa11.47□□□□□ -0.57
TRIM3-213ENST00000533309 JPT2Q9H910 190 aa11.47□□□□□ -0.57
TRIM3-213ENST00000533309 TMA7Q9Y2S6 64 aaKnown RBP11.47□□□□□ -0.57
TRIM3-213ENST00000533309 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 TRGC1P0CF51 173 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 KIAA1644Q3SXP7 199 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 SYT8Q8NBV8 401 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 PTH2Q96A98 100 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 RNF185Q96GF1 192 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 AP1S3Q96PC3 154 aa11.46□□□□□ -0.57
TRIM3-213ENST00000533309 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.58
TRIM3-213ENST00000533309 OR11H2Q8NH07 326 aa11.46□□□□□ -0.58
TRIM3-213ENST00000533309 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.58
TRIM3-213ENST00000533309 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BKO60814 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BJP06899 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BOP23527 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BBP33778 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BDP58876 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BCP62807 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST2H2BEQ16778 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.45□□□□□ -0.58
TRIM3-213ENST00000533309 PIK3CD-AS1Q5SR53 167 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BHQ93079 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BNQ99877 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 HIST1H2BMQ99879 126 aa11.45□□□□□ -0.58
TRIM3-213ENST00000533309 RAB4AP20338 218 aa11.44□□□□□ -0.58
TRIM3-213ENST00000533309 LINC00315P59091 139 aa11.44□□□□□ -0.58
TRIM3-213ENST00000533309 RASL10AQ92737 203 aa11.44□□□□□ -0.58
TRIM3-213ENST00000533309 SAMD10Q9BYL1 202 aa11.44□□□□□ -0.58
TRIM3-213ENST00000533309 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
TRIM3-213ENST00000533309 HUWE1Q7Z6Z7 4374 aaKnown RBP11.44□□□□□ -0.58
TRIM3-213ENST00000533309 RAB5BP61020 215 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
TRIM3-213ENST00000533309 Q6ZTI0 123 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms