RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ABCC10Q5T3U5 1492 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 RB1CC1Q8TDY2 1594 aa2.06□□□□□ -2.08
AC055878.1-201ENST00000531858 KIAA2026Q5HYC2 2103 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 SHANK1Q9Y566 2161 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 TRGV2A0A075B6R0 118 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 JMJD7-PLA2G4BH0Y9G9 81 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 SSSCA1O60232 199 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 PDE6GP18545 87 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 DCDP81605 110 aaKnown RBP2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 NCMAPQ5T1S8 102 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 TMEM14CQ9P0S9 112 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 SNURFQ9Y675 71 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 NSD3Q9BZ95 1437 aa2.05□□□□□ -2.08
AC055878.1-201ENST00000531858 LINC00322Q6ZN03 302 aaPredicted RBP2.04□□□□□ -2.08
AC055878.1-201ENST00000531858 SBSPONQ8IVN8 264 aa2.04□□□□□ -2.08
AC055878.1-201ENST00000531858 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
AC055878.1-201ENST00000531858 MRPL36Q9P0J6 103 aaKnown RBP2.04□□□□□ -2.08
AC055878.1-201ENST00000531858 KDM6BO15054 1643 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 PTPRMP28827 1452 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 TEX14Q8IWB6 1497 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 TRBV10-3A0A0K0K1G6 114 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 UBE2L5PA0A1B0GUS4 154 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 PPYP01298 95 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 IL7P13232 177 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 UBE2L3P68036 154 aaKnown RBP2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 CSAG1Q6PB30 78 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 C10orf105Q8TEF2 133 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 ODF3Q96PU9 254 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 AP4S1Q9Y587 144 aa2.03□□□□□ -2.08
AC055878.1-201ENST00000531858 BCORL1Q5H9F3 1711 aa2.03□□□□□ -2.09
AC055878.1-201ENST00000531858 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.03□□□□□ -2.09
AC055878.1-201ENST00000531858 ATG2AQ2TAZ0 1938 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 HIGD1CA8MV81 97 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 IGKCP01834 107 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 LINC00032P0C843 101 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 S100A10P60903 97 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 CCL8P80075 99 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 COMMD6Q7Z4G1 85 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 DEFB132Q7Z7B7 95 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 SNHG12Q9BXW3 62 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 LTBP2Q14767 1821 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 KIAA1549LQ6ZVL6 1849 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 LRP5O75197 1615 aa2.02□□□□□ -2.09
AC055878.1-201ENST00000531858 CPSF1Q10570 1443 aaKnown RBP2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 IGKV3-7A0A075B6H7 116 aa2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 IGLV3-1P01715 115 aa2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 UBE2G1P62253 170 aa2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 DPY30Q9C005 99 aa2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 DPH3P1Q9H4G8 78 aa2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 COL11A1P12107 1806 aaPredicted RBP2.01□□□□□ -2.09
AC055878.1-201ENST00000531858 C10orf71Q711Q0 1435 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 TEX49A0A1B0GTD5 131 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 HCRTO43612 131 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 MPC2O95563 127 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 INSL4Q14641 139 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 KRTAP13-4Q3LI77 160 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 SPATA45Q537H7 98 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 ZNF818PQ6ZRF7 136 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 FREM3P0C091 2139 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 ADGRL2O95490 1459 aa2□□□□□ -2.09
AC055878.1-201ENST00000531858 TANC2Q9HCD6 1990 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 CCKP06307 115 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 KRTAP10-1P60331 282 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 DEFB103AP81534 67 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 GDF5OSQ5U4N7 250 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 AMELYQ99218 206 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 LIMD2Q9BT23 127 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 V9GYS6 101 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 MYH7P12883 1935 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 AKAP11Q9UKA4 1901 aa1.99□□□□□ -2.09
AC055878.1-201ENST00000531858 MYH1P12882 1939 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 HELZP42694 1942 aaKnown RBP1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 TRAV13-2A0A0B4J235 113 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 TRAV12-3A0A0B4J271 114 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 SIX6O95475 246 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 IFI27L1Q96BM0 104 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 ZNF625Q96I27 306 aaPredicted RBP1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 HEATR5BQ9P2D3 2071 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 STRCP1A6NGW2 1772 aa1.98□□□□□ -2.09
AC055878.1-201ENST00000531858 ARHGAP5Q13017 1502 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 GAPVD1Q14C86 1478 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 FYCO1Q9BQS8 1478 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 RAPGEF2Q9Y4G8 1499 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 KIF13AQ9H1H9 1805 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 TRAV23DV6A0A075B6W5 121 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 KRTAP10-10P60014 251 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 RBM3P98179 157 aaKnown RBP1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 S100A7L2Q5SY68 101 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 PPP1R1CQ8WVI7 109 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 ZCCHC13Q8WW36 166 aaKnown RBP1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 WFDC10AQ9H1F0 79 aa1.97□□□□□ -2.09
AC055878.1-201ENST00000531858 SDK2Q58EX2 2172 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 CDK12Q9NYV4 1490 aaPredicted RBP1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 DNAL4O96015 105 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms