RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 TMEM242Q9NWH2 141 aa13.69□□□□□ -0.22
SMPD1-205ENST00000531303 NAT8BQ9UHF3 227 aa13.69□□□□□ -0.22
SMPD1-205ENST00000531303 PHLDA3Q9Y5J5 127 aa13.69□□□□□ -0.22
SMPD1-205ENST00000531303 A0A1W2PPQ1 181 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 TMEM88Q6PEY1 159 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 Q8NAQ8 132 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 NUP35Q8NFH5 326 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 OR10AG1Q8NH19 301 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 NOP10Q9NPE3 64 aaKnown RBP13.68□□□□□ -0.22
SMPD1-205ENST00000531303 TENM3Q9P273 2699 aa13.68□□□□□ -0.22
SMPD1-205ENST00000531303 PLAC8L1A1L4L8 177 aa13.67□□□□□ -0.22
SMPD1-205ENST00000531303 M0R381 172 aa13.67□□□□□ -0.22
SMPD1-205ENST00000531303 CBLN2Q8IUK8 224 aa13.67□□□□□ -0.22
SMPD1-205ENST00000531303 S100PP25815 95 aa13.67□□□□□ -0.22
SMPD1-205ENST00000531303 SSBP4Q9BWG4 385 aaPredicted RBP13.67□□□□□ -0.22
SMPD1-205ENST00000531303 SCRT2Q9NQ03 307 aa13.67□□□□□ -0.22
SMPD1-205ENST00000531303 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
SMPD1-205ENST00000531303 FAM231BA6NCW3 169 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 F2Z2F3 143 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 SNAI2O43623 268 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 OR5AL1P0C617 328 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 MED14OSP0DP75 135 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 CTRLP40313 264 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 FOXA3P55318 350 aaPredicted RBP13.66□□□□□ -0.22
SMPD1-205ENST00000531303 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 KCNIP4Q6PIL6 250 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 BORCS7Q96B45 105 aa13.66□□□□□ -0.22
SMPD1-205ENST00000531303 TRGV1A0A0A0MS02 117 aa13.65□□□□□ -0.22
SMPD1-205ENST00000531303 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
SMPD1-205ENST00000531303 IMMP2LQ96T52 175 aa13.65□□□□□ -0.22
SMPD1-205ENST00000531303 SPXQ9BT56 116 aa13.65□□□□□ -0.22
SMPD1-205ENST00000531303 M0R2P5 195 aa13.64□□□□□ -0.23
SMPD1-205ENST00000531303 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
SMPD1-205ENST00000531303 MRPL54Q6P161 138 aaKnown RBP13.64□□□□□ -0.23
SMPD1-205ENST00000531303 IL17DQ8TAD2 202 aa13.64□□□□□ -0.23
SMPD1-205ENST00000531303 SMCO4Q9NRQ5 59 aa13.64□□□□□ -0.23
SMPD1-205ENST00000531303 MSRB1Q9NZV6 116 aa13.64□□□□□ -0.23
SMPD1-205ENST00000531303 A0A1B0GUT8 65 aa13.63□□□□□ -0.23
SMPD1-205ENST00000531303 DAZ2Q13117 558 aaKnown RBP13.63□□□□□ -0.23
SMPD1-205ENST00000531303 TWIST1Q15672 202 aa13.63□□□□□ -0.23
SMPD1-205ENST00000531303 Q6ZTI0 123 aa13.63□□□□□ -0.23
SMPD1-205ENST00000531303 DNAH9Q9NYC9 4486 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 A0A0J9YWU9 116 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 CXorf65A6NEN9 183 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 NTF3P20783 257 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 CACNG7P62955 275 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 FAM222AQ5U5X8 452 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 ZFP82Q8N141 532 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 SYT8Q8NBV8 401 aa13.62□□□□□ -0.23
SMPD1-205ENST00000531303 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 GAGE7O76087 117 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 DEFB130BP0DP73 79 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 DEFB130AP0DP74 79 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 HUWE1Q7Z6Z7 4374 aaKnown RBP13.61□□□□□ -0.23
SMPD1-205ENST00000531303 TGIF2-C20orf24A0A0A6YYL0 155 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 CAMPP49913 170 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 RIGQ13278 110 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 BTF3L4Q96K17 158 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 JPT2Q9H910 190 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 CELA1Q9UNI1 258 aa13.61□□□□□ -0.23
SMPD1-205ENST00000531303 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
SMPD1-205ENST00000531303 ELOBQ15370 118 aa13.6□□□□□ -0.23
SMPD1-205ENST00000531303 DKK2Q9UBU2 259 aa13.6□□□□□ -0.23
SMPD1-205ENST00000531303 PRKDCP78527 4128 aaKnown RBP13.6□□□□□ -0.23
SMPD1-205ENST00000531303 WDR73Q6P4I2 378 aa13.59□□□□□ -0.23
SMPD1-205ENST00000531303 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
SMPD1-205ENST00000531303 TRGV2A0A075B6R0 118 aa13.58□□□□□ -0.24
SMPD1-205ENST00000531303 NXPH4O95158 308 aa13.58□□□□□ -0.24
SMPD1-205ENST00000531303 SPART-AS1P0CW21 52 aa13.58□□□□□ -0.24
SMPD1-205ENST00000531303 LGALS9BQ3B8N2 356 aa13.58□□□□□ -0.24
SMPD1-205ENST00000531303 RASL10AQ92737 203 aa13.58□□□□□ -0.24
SMPD1-205ENST00000531303 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
SMPD1-205ENST00000531303 IGHV4-4A0A075B6R2 117 aa13.57□□□□□ -0.24
SMPD1-205ENST00000531303 A0A087WWL8 130 aa13.57□□□□□ -0.24
SMPD1-205ENST00000531303 LYRM9A8MSI8 78 aa13.57□□□□□ -0.24
SMPD1-205ENST00000531303 IGHV3-53P01767 116 aa13.57□□□□□ -0.24
SMPD1-205ENST00000531303 NACAE9PAV3 2078 aa13.57□□□□□ -0.24
SMPD1-205ENST00000531303 TRAV9-1A0A075B6T8 112 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 EVI2AP22794 236 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 RAB4BP61018 213 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 HBBP68871 147 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 C14orf178Q8N769 122 aaPredicted RBP13.56□□□□□ -0.24
SMPD1-205ENST00000531303 PTH2Q96A98 100 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 YPEL4Q96NS1 127 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 SAMD10Q9BYL1 202 aa13.56□□□□□ -0.24
SMPD1-205ENST00000531303 IGHV3-73A0A0B4J1V6 119 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 DAD1P61803 113 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 FAM74A4Q5TZK3 123 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 ATP5L2Q7Z4Y8 100 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 COL7A1Q02388 2944 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 A0A1B0GXF2 115 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 TRGC1P0CF51 173 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 AP1S3Q96PC3 154 aa13.55□□□□□ -0.24
SMPD1-205ENST00000531303 SMIM17P0DL12 118 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 CFAP126Q5VTH2 177 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms