RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 CRHBPP24387 322 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CD24P25063 80 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CRYBB3P26998 211 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CASP1P29466 404 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 S100A7P31151 101 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CSN1S1P47710 185 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 PIGPP57054 158 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 FXYD7P58549 80 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 YPEL3P61236 119 aaPredicted RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 RHEBQ15382 184 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CCDC153Q494R4 210 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 SPANXN3Q5MJ09 141 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 OR4X2Q8NGF9 303 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 OR4D11Q8NGI4 311 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 OR5A1Q8NGJ0 315 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 OR51T1Q8NGJ9 327 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CLDND2Q8NHS1 167 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 SLC25A40Q8TBP6 338 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 THEM6Q8WUY1 208 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 MBD3L1Q8WWY6 194 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 POP5Q969H6 163 aaKnown RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 MUCL1Q96DR8 90 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 ADAT3Q96EY9 351 aaPredicted RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 ERMAPQ96PL5 475 aaPredicted RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 TSC22D3Q99576 134 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CGREF1Q99674 301 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 TMEM126AQ9H061 195 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 FAM107BQ9H098 131 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 C11orf68Q9H3H3 251 aaKnown RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 TMEM138Q9NPI0 162 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 IL36BQ9NZH7 164 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 GSKIPQ9P0R6 139 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 JPT1Q9UK76 154 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 FUT9Q9Y231 359 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 CYSLTR1Q9Y271 337 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 SOX21Q9Y651 276 aaPredicted RBP1.15□□□□□ -2.23
CD44-233ENST00000531141 VPS13DQ5THJ4 4388 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 PKD1P98161 4303 aa1.15□□□□□ -2.23
CD44-233ENST00000531141 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 DNAH17Q9UFH2 4485 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 ARRDC5A6NEK1 342 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 LYNX1G3V0Z9 82 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 H0YGG7 62 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 I3L521 148 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 J3KT08 172 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 DEGS1O15121 323 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 GNRH2O43555 120 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 BANF1O75531 89 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 IGKV1-5P01602 117 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 IGHV1-69P01742 117 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 CSN2P05814 226 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 SMIM17P0DL12 118 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 LYNX1P0DP58 116 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 OGNP20774 298 aaKnown RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 S100A4P26447 101 aaKnown RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 SDC4P31431 198 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 EMP1P54849 157 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 AQP4P55087 323 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 TAS2R30P59541 319 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 TPI1P60174 286 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 RPL30P62888 115 aaKnown RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 PSG9Q00887 426 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 RPL18Q07020 188 aaKnown RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 PLCXD2Q0VAA5 305 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 RRN3P1Q2M238 152 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 DEFB112Q30KQ8 113 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 SMIM21Q3B7S5 101 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 AADACL3Q5VUY0 350 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 AGTRAPQ6RW13 159 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 LCA10Q71F78 164 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 TRAPPC6BQ86SZ2 158 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 CROCCP2Q86T23 111 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 LRRC28Q86X40 367 aaPredicted RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 DAND5Q8N907 189 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 SMCR5Q8TEV8 140 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 CANT1Q8WVQ1 401 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 C1orf54Q8WWF1 131 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 H1FXQ92522 213 aaKnown RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 TSLPQ969D9 159 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 CCDC115Q96NT0 180 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 OR2J1Q9GZK6 312 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 TPT1P8Q9HAU6 139 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 PROK2Q9HC23 129 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 MED11Q9P086 117 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 AMMECR1Q9Y4X0 333 aaPredicted RBP1.14□□□□□ -2.23
CD44-233ENST00000531141 ASB4Q9Y574 426 aa1.14□□□□□ -2.23
CD44-233ENST00000531141 TRAV36DV7A0A075B6V5 113 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 A0A087WX48 190 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 MDFIC2A0A1B0GVS7 189 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 IGKV2-29A2NJV5 120 aaPredicted RBP1.13□□□□□ -2.23
CD44-233ENST00000531141 MEIS3P1A6NDR6 274 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 FABP5P3A8MUU1 101 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 CLDN25C9JDP6 229 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 CYB5BO43169 146 aa1.13□□□□□ -2.23
CD44-233ENST00000531141 NDUFA2O43678 99 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms