RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SIRPDQ9H106 197 aa6.56□□□□□ -1.36
CTNND1-227ENST00000530748 LTBP2Q14767 1821 aa6.56□□□□□ -1.36
CTNND1-227ENST00000530748 OBSL1O75147 1896 aa6.56□□□□□ -1.36
CTNND1-227ENST00000530748 hADV29S1A0JD25 119 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 MDC1Q14676 2089 aaKnown RBP6.55□□□□□ -1.36
CTNND1-227ENST00000530748 TRAV4A0A0B4J268 109 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 TRAV12-1A0A0B4J245 112 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 ETDCA0A1B0GVM5 59 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 H3BMG7 143 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 SPRY2O43597 315 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 IGLV2-14P01704 120 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 SEM1Q6ZVN7 128 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
CTNND1-227ENST00000530748 KIAA1549LQ6ZVL6 1849 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 COL4A4P53420 1690 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-227ENST00000530748 C5orf38Q86SI9 138 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 ACYP1P07311 99 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 Q6ZVH6 145 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 Q8N1Y9 231 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 NPSP0C0P6 89 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 IGKV1-17P01599 117 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 SPTA1P02549 2419 aa6.54□□□□□ -1.36
CTNND1-227ENST00000530748 GAGE12HA6NDE8 117 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 A6NDX4 124 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 BAALCQ8WXS3 180 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 NRGNQ92686 78 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 RNF183Q96D59 192 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 NCR3O14931 201 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 MUSTN1Q8IVN3 82 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 A0A1W2PNU3 283 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-227ENST00000530748 SPTBP11277 2137 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 IGHG2P01859 326 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
CTNND1-227ENST00000530748 EP300Q09472 2414 aaPredicted RBP6.52□□□□□ -1.36
CTNND1-227ENST00000530748 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.36
CTNND1-227ENST00000530748 NTN5Q8WTR8 489 aaPredicted RBP6.52□□□□□ -1.36
CTNND1-227ENST00000530748 PRORYQ9H606 182 aa6.52□□□□□ -1.36
CTNND1-227ENST00000530748 ZNF106Q9H2Y7 1883 aaKnown RBP6.52□□□□□ -1.37
CTNND1-227ENST00000530748 LYPD6Q86Y78 171 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 NCKAP5O14513 1909 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 DENND4CQ5VZ89 1909 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 H0YGX0 51 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 GTSF1Q8WW33 167 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 ARHGEF17Q96PE2 2063 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-227ENST00000530748 CXCL5P42830 114 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 TP53BP1Q12888 1972 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-227ENST00000530748 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 IGLV1-47P01700 117 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 CTRLP40313 264 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 FBXL19-AS1Q494R0 122 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 LRRC75A-AS1Q8N1F1 130 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
CTNND1-227ENST00000530748 COL4A3Q01955 1670 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 KIR2DL5BA0A0G2JN68 375 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 KIR2DL5BA0A0G2JPC4 375 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 CLPSL1A2RUU4 121 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 NDUFA1O15239 70 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 FUSP35637 526 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTNND1-227ENST00000530748 KIR2DL5AQ8N109 375 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 IGLL5B9A064 214 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 ABCA4P78363 2273 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
CTNND1-227ENST00000530748 LRRK1Q38SD2 2015 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 CRYBA4P53673 196 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 HIST2H2BCQ6DN03 193 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 DNAJC9-AS1A6NH13 148 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 NDUFA11Q86Y39 141 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
CTNND1-227ENST00000530748 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 PLA2G5P39877 138 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 INSL3P51460 131 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 MPDZO75970 2070 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 ZNF318Q5VUA4 2279 aa6.5□□□□□ -1.37
CTNND1-227ENST00000530748 A0A0J9YXV3 536 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 LINC00173Q6ZV60 143 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 TMEM131Q92545 1883 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
CTNND1-227ENST00000530748 MAP6D1Q9H9H5 199 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 YLPM1P49750 1951 aaKnown RBP6.49□□□□□ -1.37
CTNND1-227ENST00000530748 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 UBE2AP49459 152 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 LOXL1Q08397 574 aaPredicted RBP6.49□□□□□ -1.37
CTNND1-227ENST00000530748 COA6Q5JTJ3 125 aaKnown RBP6.49□□□□□ -1.37
CTNND1-227ENST00000530748 E7EUB6 86 aa6.49□□□□□ -1.37
CTNND1-227ENST00000530748 Q8NA96 180 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms