RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 PHLDA3Q9Y5J5 127 aa17.74■□□□□ 0.43
ME3-209ENST00000530520 OR5AL1P0C617 328 aa17.74■□□□□ 0.43
ME3-209ENST00000530520 MUC4Q99102 2169 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 HIGD1CA8MV81 97 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 SNAI2O43623 268 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 FAM222AQ5U5X8 452 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 LYZL1Q6UWQ5 148 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 SSBP4Q9BWG4 385 aaPredicted RBP17.73■□□□□ 0.43
ME3-209ENST00000530520 SCRT2Q9NQ03 307 aa17.73■□□□□ 0.43
ME3-209ENST00000530520 A0A087WWC5 75 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 TRGV1A0A0A0MS02 117 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 MUC21A0A0G2JKD1 596 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 MUC21A0A140T8X8 626 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 FAM231BA6NCW3 169 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 M0R2P5 195 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 PGLYRP4Q96LB8 373 aa17.72■□□□□ 0.43
ME3-209ENST00000530520 MRPL16Q9NX20 251 aaKnown RBP17.72■□□□□ 0.43
ME3-209ENST00000530520 SMIM27A0A1W2PRY6 76 aa17.71■□□□□ 0.43
ME3-209ENST00000530520 F2Z2F3 143 aa17.71■□□□□ 0.43
ME3-209ENST00000530520 OR10AG1Q8NH19 301 aa17.71■□□□□ 0.43
ME3-209ENST00000530520 DKK2Q9UBU2 259 aa17.71■□□□□ 0.43
ME3-209ENST00000530520 U3KQK5 164 aa17.71■□□□□ 0.43
ME3-209ENST00000530520 LYRM9A8MSI8 78 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 SPINK4O60575 86 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 CTRLP40313 264 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 SSTP61278 116 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 SPANXN1Q5VSR9 72 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 NAT8BQ9UHF3 227 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 CELA1Q9UNI1 258 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 M0R381 172 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 SPART-AS1P0CW21 52 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 FOXA3P55318 350 aaPredicted RBP17.7■□□□□ 0.42
ME3-209ENST00000530520 Q6ZTI0 123 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 SYT8Q8NBV8 401 aa17.7■□□□□ 0.42
ME3-209ENST00000530520 LGALS9BQ3B8N2 356 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 ZNF876PQ49A33 203 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 ATRAIDQ6UW56 229 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 ZFP82Q8N141 532 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 BORCS7Q96B45 105 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 TMEM242Q9NWH2 141 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 DNAH9Q9NYC9 4486 aa17.69■□□□□ 0.42
ME3-209ENST00000530520 TEX48A0A1B0GUV7 120 aa17.68■□□□□ 0.42
ME3-209ENST00000530520 NUP35Q8NFH5 326 aa17.68■□□□□ 0.42
ME3-209ENST00000530520 GAGE12BA1L429 117 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 CXorf65A6NEN9 183 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 GAGE7O76087 117 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 GAGE12FP0CL80 117 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 GAGE12GP0CL81 117 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 GAGE12IP0CL82 117 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 DEFB130BP0DP73 79 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 DEFB130AP0DP74 79 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 S100A1P23297 94 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 DMRTA1Q5VZB9 504 aa17.67■□□□□ 0.42
ME3-209ENST00000530520 FAM3BP58499 235 aaPredicted RBP17.66■□□□□ 0.42
ME3-209ENST00000530520 CACNG7P62955 275 aa17.66■□□□□ 0.42
ME3-209ENST00000530520 RASL10AQ92737 203 aa17.66■□□□□ 0.42
ME3-209ENST00000530520 KCNIP4Q6PIL6 250 aa17.66■□□□□ 0.42
ME3-209ENST00000530520 PTH2Q96A98 100 aa17.66■□□□□ 0.42
ME3-209ENST00000530520 IMMP2LQ96T52 175 aa17.66■□□□□ 0.42
ME3-209ENST00000530520 HUWE1Q7Z6Z7 4374 aaKnown RBP17.65■□□□□ 0.42
ME3-209ENST00000530520 DAD1P61803 113 aa17.65■□□□□ 0.42
ME3-209ENST00000530520 CNFNQ9BYD5 112 aa17.65■□□□□ 0.42
ME3-209ENST00000530520 TRGV2A0A075B6R0 118 aa17.64■□□□□ 0.41
ME3-209ENST00000530520 A0A1B0GUT8 65 aa17.64■□□□□ 0.41
ME3-209ENST00000530520 NXPH4O95158 308 aa17.64■□□□□ 0.41
ME3-209ENST00000530520 S100PP25815 95 aa17.64■□□□□ 0.41
ME3-209ENST00000530520 NTF3P20783 257 aa17.63■□□□□ 0.41
ME3-209ENST00000530520 WDR73Q6P4I2 378 aa17.63■□□□□ 0.41
ME3-209ENST00000530520 LINC00612Q8N6U2 182 aa17.63■□□□□ 0.41
ME3-209ENST00000530520 C11orf45Q8TAV5 145 aa17.63■□□□□ 0.41
ME3-209ENST00000530520 URGCP-MRPS24S4R325 110 aa17.63■□□□□ 0.41
ME3-209ENST00000530520 TWIST1Q15672 202 aa17.62■□□□□ 0.41
ME3-209ENST00000530520 PIK3CD-AS1Q5SR53 167 aa17.62■□□□□ 0.41
ME3-209ENST00000530520 IGHV4-4A0A075B6R2 117 aa17.62■□□□□ 0.41
ME3-209ENST00000530520 NDUFAF3Q9BU61 184 aa17.62■□□□□ 0.41
ME3-209ENST00000530520 MSRB1Q9NZV6 116 aa17.62■□□□□ 0.41
ME3-209ENST00000530520 RIGQ13278 110 aa17.61■□□□□ 0.41
ME3-209ENST00000530520 EDA2RQ9HAV5 297 aa17.6■□□□□ 0.41
ME3-209ENST00000530520 C12orf74Q32Q52 190 aa17.59■□□□□ 0.41
ME3-209ENST00000530520 MRPL54Q6P161 138 aaKnown RBP17.59■□□□□ 0.41
ME3-209ENST00000530520 BTF3L4Q96K17 158 aa17.59■□□□□ 0.41
ME3-209ENST00000530520 AP1S3Q96PC3 154 aa17.59■□□□□ 0.41
ME3-209ENST00000530520 JPT2Q9H910 190 aa17.59■□□□□ 0.41
ME3-209ENST00000530520 STAB2Q8WWQ8 2551 aa17.58■□□□□ 0.41
ME3-209ENST00000530520 A8MWV9 139 aa17.58■□□□□ 0.41
ME3-209ENST00000530520 NANOS2P60321 138 aaKnown RBP17.58■□□□□ 0.41
ME3-209ENST00000530520 OR4C5Q8NGB2 326 aa17.58■□□□□ 0.41
ME3-209ENST00000530520 NACAE9PAV3 2078 aa17.58■□□□□ 0.4
ME3-209ENST00000530520 IGHV3-53P01767 116 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 TRGC1P0CF51 173 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 TRAV4A0A0B4J268 109 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 FAM74A4Q5TZK3 123 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 CFAP126Q5VTH2 177 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 TMEM88Q6PEY1 159 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 CBLN2Q8IUK8 224 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 C18orf15Q96N68 181 aa17.57■□□□□ 0.4
ME3-209ENST00000530520 TRAV9-1A0A075B6T8 112 aa17.56■□□□□ 0.4
ME3-209ENST00000530520 A0A087WWL8 130 aa17.56■□□□□ 0.4
ME3-209ENST00000530520 RS1O15537 224 aa17.56■□□□□ 0.4
ME3-209ENST00000530520 ATP5L2Q7Z4Y8 100 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms