RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 G3V4G9 280 aa14.67□□□□□ -0.06
PCF11-203ENST00000530304 TAL2Q16559 108 aa14.67□□□□□ -0.06
PCF11-203ENST00000530304 A6NDX4 124 aa14.66□□□□□ -0.06
PCF11-203ENST00000530304 C2orf66Q6UXQ4 117 aa14.66□□□□□ -0.06
PCF11-203ENST00000530304 SPTAN1Q13813 2472 aaKnown RBP14.66□□□□□ -0.06
PCF11-203ENST00000530304 SRD5A1P18405 259 aa14.65□□□□□ -0.06
PCF11-203ENST00000530304 HIST1H4GQ99525 98 aa14.65□□□□□ -0.06
PCF11-203ENST00000530304 CSTL1Q9H114 145 aa14.65□□□□□ -0.06
PCF11-203ENST00000530304 BAALCQ8WXS3 180 aa14.65□□□□□ -0.06
PCF11-203ENST00000530304 SPTBN4Q9H254 2564 aa14.65□□□□□ -0.06
PCF11-203ENST00000530304 TRBV7-9A0A0J9YWB2 115 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 OR11H12B2RN74 326 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 OR11H1Q8NG94 326 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 OR11H2Q8NH07 326 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 C10orf105Q8TEF2 133 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 DAZ1Q9NQZ3 744 aaKnown RBP14.64□□□□□ -0.07
PCF11-203ENST00000530304 AGRNO00468 2067 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 COL12A1Q99715 3063 aa14.64□□□□□ -0.07
PCF11-203ENST00000530304 NCOR2Q9Y618 2525 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 MYMXA0A1B0GTQ4 84 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 IGLL5B9A064 214 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 E9PLD3 99 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 IGLV1-40P01703 118 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 EDN2P20800 178 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 C12orf74Q32Q52 190 aa14.63□□□□□ -0.07
PCF11-203ENST00000530304 PPP1R17O96001 155 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 CHD8Q9HCK8 2581 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 MUC4Q99102 2169 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 RIPPLY3P57055 190 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 POM121L12Q8N7R1 296 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 CCL19Q99731 98 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 ITPR1Q14643 2758 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 TRBV7-3A0A075B6L6 115 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 PRSS29PA6NIE9 313 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 KIF25-AS1Q9Y6Z4 181 aa14.62□□□□□ -0.07
PCF11-203ENST00000530304 KLLNB2CW77 178 aa14.61□□□□□ -0.07
PCF11-203ENST00000530304 NXPH4O95158 308 aa14.61□□□□□ -0.07
PCF11-203ENST00000530304 LINC00315P59091 139 aa14.61□□□□□ -0.07
PCF11-203ENST00000530304 WFDC12Q8WWY7 111 aa14.6□□□□□ -0.07
PCF11-203ENST00000530304 PRORYQ9H606 182 aa14.6□□□□□ -0.07
PCF11-203ENST00000530304 FAM159AQ6UWV7 190 aa14.6□□□□□ -0.07
PCF11-203ENST00000530304 FOXI2Q6ZQN5 318 aa14.6□□□□□ -0.07
PCF11-203ENST00000530304 ZNF479Q96JC4 524 aa14.6□□□□□ -0.07
PCF11-203ENST00000530304 IGHV4-30-2A0A087WSY4 118 aa14.59□□□□□ -0.07
PCF11-203ENST00000530304 LINC01619G3V211 115 aa14.59□□□□□ -0.07
PCF11-203ENST00000530304 CLEC2AQ6UVW9 174 aa14.59□□□□□ -0.07
PCF11-203ENST00000530304 JPT2Q9H910 190 aa14.59□□□□□ -0.07
PCF11-203ENST00000530304 NDUFS8O00217 210 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 DUSP14O95147 198 aaKnown RBP14.58□□□□□ -0.08
PCF11-203ENST00000530304 CFHR3Q02985 330 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 DCANP1Q8TF63 244 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 PRADC1Q9BSG0 188 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 IGHV4OR15-8A0A075B7B6 117 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 A0A087WW49 117 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 LGALS1P09382 135 aaKnown RBP14.58□□□□□ -0.08
PCF11-203ENST00000530304 CYSLTR1Q9Y271 337 aa14.58□□□□□ -0.08
PCF11-203ENST00000530304 CRYGDP07320 174 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 MSMBP08118 114 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 ID1P41134 155 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 RPL24P83731 157 aaKnown RBP14.57□□□□□ -0.08
PCF11-203ENST00000530304 DEFB104AQ8WTQ1 72 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 K7EMT4 169 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 ATP5J2P56134 94 aa14.57□□□□□ -0.08
PCF11-203ENST00000530304 TRAV12-3A0A0B4J271 114 aa14.56□□□□□ -0.08
PCF11-203ENST00000530304 TSHBP01222 138 aa14.56□□□□□ -0.08
PCF11-203ENST00000530304 TMEM95Q3KNT9 176 aa14.56□□□□□ -0.08
PCF11-203ENST00000530304 SUMO4Q6EEV6 95 aa14.56□□□□□ -0.08
PCF11-203ENST00000530304 A0A087WWL8 130 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 TEX48A0A1B0GUV7 120 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 AVPP01185 164 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 CD7P09564 240 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 TP53TG1Q9Y2A0 90 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 A0A1B0GWB2 263 aa14.55□□□□□ -0.08
PCF11-203ENST00000530304 POLR2KP53803 58 aaKnown RBP14.55□□□□□ -0.08
PCF11-203ENST00000530304 RPL32P62910 135 aaKnown RBP14.55□□□□□ -0.08
PCF11-203ENST00000530304 MAP1AP78559 2803 aaPredicted RBP14.55□□□□□ -0.08
PCF11-203ENST00000530304 ZNF815PA8K554 130 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 SCGB2A2Q13296 93 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 ZFP2Q6ZN57 461 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 IGIPA6NJ69 53 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 H3BMG7 143 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 RRN3P1Q2M238 152 aa14.54□□□□□ -0.08
PCF11-203ENST00000530304 F5H697 171 aa14.53□□□□□ -0.08
PCF11-203ENST00000530304 F8W1H4 67 aa14.53□□□□□ -0.08
PCF11-203ENST00000530304 COX6B1P14854 86 aa14.53□□□□□ -0.08
PCF11-203ENST00000530304 IGLV4-69A0A075B6H9 119 aa14.52□□□□□ -0.08
PCF11-203ENST00000530304 VCYO14598 125 aa14.52□□□□□ -0.08
PCF11-203ENST00000530304 WFDC2Q14508 124 aa14.52□□□□□ -0.08
PCF11-203ENST00000530304 CD300EQ496F6 205 aaPredicted RBP14.52□□□□□ -0.08
PCF11-203ENST00000530304 AMTNQ6UX39 209 aa14.52□□□□□ -0.08
PCF11-203ENST00000530304 CELSR2Q9HCU4 2923 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 PSMB8P28062 276 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 EMP1P54849 157 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 RPL39P62891 51 aaKnown RBP14.52□□□□□ -0.09
PCF11-203ENST00000530304 SAMD13Q5VXD3 122 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 KLHL30-AS1Q8NEE0 82 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 PLEKHB2Q96CS7 222 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 KIR2DL4Q99706 377 aa14.52□□□□□ -0.09
PCF11-203ENST00000530304 C11orf86A6NJI1 115 aa14.51□□□□□ -0.09
PCF11-203ENST00000530304 HOXA3O43365 443 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms