RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF738Q8NE65 137 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 ZNF555Q8NEP9 628 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 Q8TAT8 98 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 ISOC2Q96AB3 205 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 RSG1Q9BU20 258 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 PBDC1Q9BVG4 233 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 MCUBQ9NWR8 336 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 RAB22AQ9UL26 194 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 KLF12Q9Y4X4 402 aa3.95□□□□□ -1.78
SVIP-204ENST00000530199 IGKV2D-24A0A075B6R9 120 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 PNMA8CA0A1B0GUJ8 204 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 PGLYRP1O75594 196 aaPredicted RBP3.94□□□□□ -1.78
SVIP-204ENST00000530199 PMCHP20382 165 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 CACNG7P62955 275 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 INSL4Q14641 139 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 ORMDL2Q53FV1 153 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 SPINK9Q5DT21 86 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 LINC01551Q86U37 167 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 SLC7A5P1Q8MH63 180 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 SLC35G3Q8N808 338 aa3.94□□□□□ -1.78
SVIP-204ENST00000530199 RNASEH2CQ8TDP1 164 aaKnown RBP3.94□□□□□ -1.78
SVIP-204ENST00000530199 NAA50Q9GZZ1 169 aaKnown RBP3.94□□□□□ -1.78
SVIP-204ENST00000530199 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
SVIP-204ENST00000530199 IGKV1OR2-108A0A075B7D4 117 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 TCRBV3S1A0A5B6 114 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 MPDU1O75352 247 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 PFN1P07737 140 aaKnown RBP3.93□□□□□ -1.78
SVIP-204ENST00000530199 Q8N9L7 120 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 CCDC124Q96CT7 223 aaKnown RBP3.93□□□□□ -1.78
SVIP-204ENST00000530199 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 C2orf50Q96LR7 162 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 GPR82Q96P67 336 aa3.93□□□□□ -1.78
SVIP-204ENST00000530199 MRPL16Q9NX20 251 aaKnown RBP3.93□□□□□ -1.78
SVIP-204ENST00000530199 IGLV4-69A0A075B6H9 119 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 TRAV12-3A0A0B4J271 114 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 ANKRD65E5RJM6 399 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 ATG12O94817 140 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 SFTA3P0C7M3 94 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 SEC11BP0C7V7 166 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 CRYGAP11844 174 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 CXCL3P19876 107 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 RAB5AP20339 215 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 PSMA1P25786 263 aaKnown RBP3.92□□□□□ -1.78
SVIP-204ENST00000530199 PFN2P35080 140 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 RPS25P62851 125 aaKnown RBP3.92□□□□□ -1.78
SVIP-204ENST00000530199 DEFB116Q30KQ4 102 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 EIF4E3Q8N5X7 224 aaKnown RBP3.92□□□□□ -1.78
SVIP-204ENST00000530199 ZNF431Q8TF32 576 aaPredicted RBP3.92□□□□□ -1.78
SVIP-204ENST00000530199 ODF3Q96PU9 254 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 TIMM17AQ99595 171 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 MED4Q9NPJ6 270 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 CBY1Q9Y3M2 126 aa3.92□□□□□ -1.78
SVIP-204ENST00000530199 SNRPGP15A8MWD9 76 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 IGKV1-39P01597 117 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 IGKV1D-39P04432 117 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 UCHL1P09936 223 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 MYL12AP19105 171 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 CBX5P45973 191 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 FXYD4P59646 89 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 VAMP3Q15836 100 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 OR5H2Q8NGV7 314 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 DNAJC30Q96LL9 226 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 PARD6GQ9BYG4 376 aaPredicted RBP3.91□□□□□ -1.78
SVIP-204ENST00000530199 GTSF1LQ9H1H1 148 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 SH3BGRL3Q9H299 93 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 FLVCR2Q9UPI3 526 aa3.91□□□□□ -1.78
SVIP-204ENST00000530199 IRGMA1A4Y4 181 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 RAB19A4D1S5 217 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 FABP12A6NFH5 140 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 NDUFS6O75380 124 aaKnown RBP3.9□□□□□ -1.79
SVIP-204ENST00000530199 PTHLHP12272 177 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 MT1HP80294 61 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 ZNF90Q03938 601 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 TPRXLQ17RH7 258 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 CDNFQ49AH0 187 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 CENPNQ96H22 339 aaPredicted RBP3.9□□□□□ -1.79
SVIP-204ENST00000530199 ACY3Q96HD9 319 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 SLIRPQ9GZT3 109 aaKnown RBP3.9□□□□□ -1.79
SVIP-204ENST00000530199 ENY2Q9NPA8 101 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 TMEM56-RWDD3S4R434 201 aa3.9□□□□□ -1.79
SVIP-204ENST00000530199 IGHV3-64A0A075B6Q5 118 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 IGKV1D-37A0A075B6S9 117 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 IGHV3OR16-9A0A0B4J2B5 98 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 SLC25A5P05141 298 aaKnown RBP3.89□□□□□ -1.79
SVIP-204ENST00000530199 FABP1P07148 127 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 FAM162BQ5T6X4 162 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 OR10P1Q8NGE3 313 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 C15orf40Q8WUR7 153 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 PDCD10Q9BUL8 212 aa3.89□□□□□ -1.79
SVIP-204ENST00000530199 C7orf71A4D174 169 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 EFCAB10A6NFE3 127 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 CENPXA8MT69 81 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 SNAI2O43623 268 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 CFDP00746 253 aaPredicted RBP3.88□□□□□ -1.79
SVIP-204ENST00000530199 OR10J4P0C629 311 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 Q0VG73 95 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 ZFP2Q6ZN57 461 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms