RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNRF2Q8NHG8 242 aa6.32□□□□□ -1.4
CMTM1-210ENST00000528441 NKX6-2Q9C056 277 aaPredicted RBP6.32□□□□□ -1.4
CMTM1-210ENST00000528441 IGHV3-73A0A0B4J1V6 119 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 TRAV4A0A0B4J268 109 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 IGHV3-16A0A0C4DH30 117 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 H3BNG1 76 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 RTL8CO15255 209 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 ORM1P02763 201 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
CMTM1-210ENST00000528441 GYPEP15421 78 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 CRYBA4P53673 196 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 ESRGQ1W209 222 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 COMMD7Q86VX2 200 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 SFT2D1Q8WV19 159 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 ZNF479Q96JC4 524 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 TXNDC17Q9BRA2 123 aa6.31□□□□□ -1.4
CMTM1-210ENST00000528441 MRPS16Q9Y3D3 137 aaKnown RBP6.31□□□□□ -1.4
CMTM1-210ENST00000528441 M0R036 132 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 SIVA1O15304 175 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 NXPH4O95158 308 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 ASIPP42127 132 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 ZNF726P1Q15940 193 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 ZNF876PQ49A33 203 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 NEGR1Q7Z3B1 354 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 Q86TA4 180 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 HIST1H2BAQ96A08 127 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 TVP23CQ96ET8 276 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 C18orf15Q96N68 181 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 ARL2-SNX15V9GYD0 113 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 MUC4Q99102 2169 aa6.3□□□□□ -1.4
CMTM1-210ENST00000528441 TMSB15BA0A087X1C1 80 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 FAM74A7A6NL05 159 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 FABP5P3A8MUU1 101 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 B4DEV8 164 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
CMTM1-210ENST00000528441 FHL2Q14192 279 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 Q6ZR54 194 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 MBD3L1Q8WWY6 194 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 RASL10AQ92737 203 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 FMC1Q96HJ9 113 aa6.29□□□□□ -1.4
CMTM1-210ENST00000528441 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 H3BVH4 76 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 K7EQD1 137 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 PAGE4O60829 102 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 FHITP49789 147 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 RHOHQ15669 191 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 TDRG1Q3Y452 100 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 UPK3BQ9BT76 320 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 LY96Q9Y6Y9 160 aa6.28□□□□□ -1.4
CMTM1-210ENST00000528441 GRIFINA4D1Z8 144 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 EVI2AP22794 236 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 OR10J3Q5JRS4 329 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 PRR27Q6MZM9 219 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 PHLDA3Q9Y5J5 127 aa6.27□□□□□ -1.41
CMTM1-210ENST00000528441 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 A0A1W2PPQ1 181 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 TMEM218A2RU14 115 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 SH2D1AO60880 128 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 IGLV2-11P01706 119 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 TAGLN2P37802 199 aaKnown RBP6.26□□□□□ -1.41
CMTM1-210ENST00000528441 TOR2AQ5JU69 321 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 ZNF506Q5JVG8 444 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 FAM162BQ5T6X4 162 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 TCEAL7Q9BRU2 100 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 SEC11CQ9BY50 192 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 GNG13Q9P2W3 67 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 ZFP30Q9Y2G7 519 aa6.26□□□□□ -1.41
CMTM1-210ENST00000528441 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
CMTM1-210ENST00000528441 PGPEP1LA6NFU8 196 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 A8MWV9 139 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 M0R381 172 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 RS1O15537 224 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 PSCAO43653 123 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 CIDEAO60543 219 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 IFNA1P01562 189 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 LINC00315P59091 139 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 CFAP126Q5VTH2 177 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 ZNF575Q86XF7 245 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 ZC2HC1AQ96GY0 325 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
CMTM1-210ENST00000528441 IGKV3D-20A0A0C4DH25 116 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 GAGE12JA6NER3 117 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 S100A9P06702 114 aaKnown RBP6.24□□□□□ -1.41
CMTM1-210ENST00000528441 ARMS2P0C7Q2 107 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 MGST1P10620 155 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms