RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MGAM2Q2M2H8 2515 aa13.86□□□□□ -0.19
SMPD1-203ENST00000527275 OR11H12B2RN74 326 aa13.86□□□□□ -0.19
SMPD1-203ENST00000527275 KRTAP21-3Q3LHN1 58 aa13.86□□□□□ -0.19
SMPD1-203ENST00000527275 URB1-AS1Q96HZ7 61 aa13.86□□□□□ -0.19
SMPD1-203ENST00000527275 KNCNA6PVL3 124 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 OR5AL1P0C617 328 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 ANXA2RQ3ZCQ2 193 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 SNAI2O43623 268 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 MRPL51Q4U2R6 128 aaKnown RBP13.85□□□□□ -0.19
SMPD1-203ENST00000527275 OR10AG1Q8NH19 301 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 C19orf73Q9NVV2 129 aa13.85□□□□□ -0.19
SMPD1-203ENST00000527275 D6R8Y8 96 aa13.84□□□□□ -0.19
SMPD1-203ENST00000527275 SCGB1D1O95968 90 aa13.84□□□□□ -0.19
SMPD1-203ENST00000527275 ODF3Q96PU9 254 aa13.84□□□□□ -0.19
SMPD1-203ENST00000527275 U3KQK5 164 aa13.84□□□□□ -0.19
SMPD1-203ENST00000527275 H3BVH4 76 aa13.83□□□□□ -0.19
SMPD1-203ENST00000527275 DUSP14O95147 198 aaKnown RBP13.83□□□□□ -0.19
SMPD1-203ENST00000527275 IGKV3-20P01619 116 aa13.83□□□□□ -0.19
SMPD1-203ENST00000527275 LEPP41159 167 aa13.83□□□□□ -0.19
SMPD1-203ENST00000527275 CHCHD1Q96BP2 118 aaKnown RBP13.83□□□□□ -0.19
SMPD1-203ENST00000527275 NOTCH1P46531 2555 aa13.83□□□□□ -0.19
SMPD1-203ENST00000527275 LINC00614P0C842 121 aa13.83□□□□□ -0.2
SMPD1-203ENST00000527275 GTSCR1Q86UQ5 136 aa13.83□□□□□ -0.2
SMPD1-203ENST00000527275 ORMDL3Q8N138 153 aa13.83□□□□□ -0.2
SMPD1-203ENST00000527275 FAM110AQ9BQ89 295 aa13.83□□□□□ -0.2
SMPD1-203ENST00000527275 S100A4P26447 101 aaKnown RBP13.82□□□□□ -0.2
SMPD1-203ENST00000527275 CACNG7P62955 275 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 SPANXN1Q5VSR9 72 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 DMRTA1Q5VZB9 504 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 G3V4G9 280 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 H3BMM0 161 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 RAB4AP20338 218 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 ASIPP42127 132 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 CMC4P56277 68 aaPredicted RBP13.82□□□□□ -0.2
SMPD1-203ENST00000527275 RNF185Q96GF1 192 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 PRELID3AQ96N28 172 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
SMPD1-203ENST00000527275 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
SMPD1-203ENST00000527275 M0R2Z0 102 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 GNRH2O43555 120 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 CKS2P33552 79 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 DNHD1Q96M86 4753 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 TRAV12-3A0A0B4J271 114 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 PRO1933Q9H354 126 aa13.81□□□□□ -0.2
SMPD1-203ENST00000527275 C7orf71A4D174 169 aa13.8□□□□□ -0.2
SMPD1-203ENST00000527275 KRTAP10-11P60412 298 aa13.8□□□□□ -0.2
SMPD1-203ENST00000527275 SMIM15Q7Z3B0 74 aa13.8□□□□□ -0.2
SMPD1-203ENST00000527275 NBEAL1Q6ZS30 2694 aa13.8□□□□□ -0.2
SMPD1-203ENST00000527275 EVI2AP22794 236 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 TSPOP30536 169 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 KRTDAPP60985 99 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 PKIAP61925 76 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 EGFEM1PQ0D2K5 195 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 FAM159AQ6UWV7 190 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 SMKR1H3BMG3 65 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 CDKN1BP46527 198 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 DEFA6Q01524 100 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
SMPD1-203ENST00000527275 TRAV12-2A0A075B6T6 113 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 MED14OSP0DP75 135 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 STHQ8IWL8 128 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 Q8N1Y9 231 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 PMCHL1Q16048 86 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 SPINK13Q1W4C9 94 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 SAMD5Q5TGI4 173 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 AMTNQ6UX39 209 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 PHLDA3Q9Y5J5 127 aa13.78□□□□□ -0.2
SMPD1-203ENST00000527275 RBMY1BA6NDE4 496 aaKnown RBP13.77□□□□□ -0.21
SMPD1-203ENST00000527275 RBMY1EA6NEQ0 496 aaKnown RBP13.77□□□□□ -0.21
SMPD1-203ENST00000527275 SPRY2O43597 315 aa13.77□□□□□ -0.21
SMPD1-203ENST00000527275 NCR2O95944 276 aa13.77□□□□□ -0.21
SMPD1-203ENST00000527275 PPBPP02775 128 aa13.77□□□□□ -0.21
SMPD1-203ENST00000527275 RBMY1DP0C7P1 496 aaKnown RBP13.77□□□□□ -0.21
SMPD1-203ENST00000527275 RNASE3P12724 160 aaKnown RBP13.77□□□□□ -0.21
SMPD1-203ENST00000527275 SCRT2Q9NQ03 307 aa13.77□□□□□ -0.21
SMPD1-203ENST00000527275 IGHV1-24A0A0C4DH33 117 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 LOC389332A0A1B0GUA5 103 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 TSTD3H0UI37 97 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 C14orf144Q96I85 54 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 M0R381 172 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 DDTP30046 118 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 IFI27P40305 119 aaPredicted RBP13.76□□□□□ -0.21
SMPD1-203ENST00000527275 FA2HQ7L5A8 372 aa13.76□□□□□ -0.21
SMPD1-203ENST00000527275 A8MTW9 85 aa13.75□□□□□ -0.21
SMPD1-203ENST00000527275 NPYP01303 97 aa13.75□□□□□ -0.21
SMPD1-203ENST00000527275 C3orf79P0CE67 100 aa13.75□□□□□ -0.21
SMPD1-203ENST00000527275 TRPT1Q86TN4 253 aaKnown RBP13.75□□□□□ -0.21
SMPD1-203ENST00000527275 AP5S1Q9NUS5 200 aa13.75□□□□□ -0.21
SMPD1-203ENST00000527275 TDRG1Q3Y452 100 aa13.75□□□□□ -0.21
SMPD1-203ENST00000527275 GAS8-AS1O95177 125 aa13.74□□□□□ -0.21
SMPD1-203ENST00000527275 FXYD7P58549 80 aa13.74□□□□□ -0.21
SMPD1-203ENST00000527275 ZNF664Q8N3J9 261 aa13.74□□□□□ -0.21
SMPD1-203ENST00000527275 LAMTOR2Q9Y2Q5 125 aa13.73□□□□□ -0.21
SMPD1-203ENST00000527275 CLUHP3Q96NS8 147 aa13.73□□□□□ -0.21
SMPD1-203ENST00000527275 RPL35AP18077 110 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms