RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PSMG4Q5JS54 123 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 C1orf137Q5JT78 98 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 FP248Q71RG6 208 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 COMMD6Q7Z4G1 85 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 C6orf201Q7Z4U5 140 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 COA5Q86WW8 74 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 C20orf197Q8N268 126 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 C15orf53Q8NAA6 179 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 DMAC1Q96GE9 116 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 PRR15LQ9BU68 103 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 PRO1854Q9UHT4 67 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 R4GMQ9 66 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 ARL2-SNX15V9GYD0 113 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 ECM29Q5VYK3 1845 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 DENND4BO75064 1496 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 PZPP20742 1482 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 NCAPD3P42695 1498 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 MYOM2P54296 1465 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 GOLGA3Q08378 1498 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 GRIN2AQ12879 1464 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 TCOF1Q13428 1488 aaKnown RBP0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 CDK12Q9NYV4 1490 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 RAPGEF2Q9Y4G8 1499 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 BRCA1P38398 1863 aaKnown RBP0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 ARAP3Q8WWN8 1544 aa0.58□□□□□ -2.32
ECHDC1-219ENST00000526299 TMEM2Q9UHN6 1383 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 THADAQ6YHU6 1953 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 PRRC2BQ5JSZ5 2229 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 DOCK3Q8IZD9 2030 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 MYO5BQ9ULV0 1848 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 RTEL1-TNFRSF6BF6WH68 1400 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 KDM6AO15550 1401 aaPredicted RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 EDC4Q6P2E9 1401 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 PRG4Q92954 1404 aaPredicted RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 SCAPERQ9BY12 1400 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 KIAA1107Q9UPP5 1409 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 MGAMO43451 1857 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 TMEM131Q92545 1883 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 DOCK5Q9H7D0 1870 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 COL1A1P02452 1464 aaPredicted RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 CFTRP13569 1480 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 ABCC10Q5T3U5 1492 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF518AQ6AHZ1 1483 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 NEO1Q92859 1461 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 IGLV3-32A0A0A0MS00 114 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 TRBV7-1A0A0A6YYK4 115 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 LOC101927531A0A1B0GV80 90 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 SMIM31A0A1B0GVY4 71 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV2-29A2NJV5 120 aaPredicted RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 HIGD1CA8MV81 97 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 D6R8Y8 96 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 H3BUT2 72 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 PDCD5O14737 125 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 NCR3O14931 201 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 CCL16O15467 120 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 IGLV1-51P01701 117 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 SMIM13P0DJ93 91 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 S100A3P33764 101 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 ROMO1P60602 79 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 CCL8P80075 99 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 HAMPP81172 84 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 SPRNQ5BIV9 151 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 Q6ZS92 163 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 MUSTN1Q8IVN3 82 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 Q8N8P6 123 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 LINC00052Q96N35 136 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 DPH3P1Q9H4G8 78 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 ST20Q9HBF5 79 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 DYNLRB1Q9NP97 96 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 MIA3Q5JRA6 1907 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 PRDM2Q13029 1718 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 SIGLEC1Q9BZZ2 1709 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 RBBP6Q7Z6E9 1792 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 CEP170Q5SW79 1584 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 KIF1BO60333 1816 aa0.57□□□□□ -2.32
ECHDC1-219ENST00000526299 TSPOAP1O95153 1857 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 ZNF609O15014 1411 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 CPSF1Q10570 1443 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 MYOM3Q5VTT5 1437 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 UACAQ9BZF9 1416 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 SCAF11Q99590 1463 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 MBD5Q9P267 1494 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 ADAMTSL1Q8N6G6 1762 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 TRBV7-3A0A075B6L6 115 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV2-40A0A087WW87 121 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 TRAV1-2A0A0B4J238 106 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 TRBV30A0A0K0K1B3 111 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 LOC285095A0A1B0GVY8 99 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 TRBV6-4A0A1B0GX49 114 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 C7orf77A4D0Y5 90 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 UMAD1C9J7I0 102 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 IGKV2D-40P01614 121 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 NMBP08949 121 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 IGLC1P0CG04 106 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 MIFP14174 115 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 GCHFRP30047 84 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 FXYD4P59646 89 aa0.56□□□□□ -2.32
ECHDC1-219ENST00000526299 Q1T7F1 81 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms