RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 ORMDL3Q8N138 153 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 C3orf22Q8N5N4 141 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 DRAM1Q8N682 238 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 RITA1Q96K30 269 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 ASCL2Q99929 193 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 PRSS22Q9GZN4 317 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 ZNF355PQ9NSJ1 428 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
CD44-218ENST00000525469 IGLV3-32A0A0A0MS00 114 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 IGKV1D-13A0A0B4J2D9 117 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 IGHV1-18A0A0C4DH31 117 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 A0A0G2JRQ6 117 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 ATOX1O00244 68 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 IGLV2-14P01704 120 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 IGKV1-13P0DP09 117 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 HLA-DMBP28068 263 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 PPIFP30405 207 aaKnown RBP3.9□□□□□ -1.79
CD44-218ENST00000525469 CFHR2P36980 270 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 FXYD2P54710 66 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 UBE2D3P61077 147 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 HSPE1P61604 102 aaKnown RBP3.9□□□□□ -1.79
CD44-218ENST00000525469 UBE2D2P62837 147 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 SPRNQ5BIV9 151 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 FAM27BQ5VT28 67 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 NUP37Q8NFH4 326 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 DDB2Q92466 427 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 RASL10AQ92737 203 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 TIMD4Q96H15 378 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 URB1-AS1Q96HZ7 61 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 ZNF488Q96MN9 340 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 SLC25A39Q9BZJ4 359 aaPredicted RBP3.9□□□□□ -1.79
CD44-218ENST00000525469 PPDPFQ9H3Y8 114 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 TCF19Q9Y242 345 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 COL7A1Q02388 2944 aa3.9□□□□□ -1.79
CD44-218ENST00000525469 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
CD44-218ENST00000525469 LINC01546A6NGU7 62 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 H3BT86 120 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 NXPH3O95157 252 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 IGKV1-39P01597 117 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 IGKV1D-39P04432 117 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CECR9P0C854 216 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CRYGAP11844 174 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CNTFRP26992 372 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CDAP32320 146 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 GLRXP35754 106 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CACNG7P62955 275 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 PLGLAQ15195 96 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 ATXN8Q156A1 80 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 PIGYQ3MUY2 71 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 ACP7Q6ZNF0 438 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 FAM19A5Q7Z5A7 132 aaPredicted RBP3.89□□□□□ -1.79
CD44-218ENST00000525469 Q8N7P7 452 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 OR8A1Q8NGG7 326 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 CYYR1Q96J86 154 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 LYZL4Q96KX0 146 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 ZNF714Q96N38 554 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 NABP2Q9BQ15 211 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 MRPL20Q9BYC9 149 aaKnown RBP3.89□□□□□ -1.79
CD44-218ENST00000525469 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 LAMTOR3Q9UHA4 124 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 FZR1Q9UM11 496 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 TENM2Q9NT68 2774 aa3.89□□□□□ -1.79
CD44-218ENST00000525469 IGHV3OR16-10A0A075B7F0 116 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 TRAV12-1A0A0B4J245 112 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 C19orf71A6NCJ1 209 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 SRRM4A7MD48 611 aaKnown RBP3.88□□□□□ -1.79
CD44-218ENST00000525469 SRRM5B3KS81 715 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 F5H697 171 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 OVOL1O14753 267 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 SLC25A20O43772 301 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 TRACP01848 142 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 RBP4P02753 201 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 COX6CP09669 75 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 P0DMU3 169 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 FAM231AP0DMU4 169 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 FAM231CP0DMU5 169 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 FCER1GP30273 86 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 PSMB2P49721 201 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 PROK1P58294 105 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 HERVK_113P61574 105 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 TMEM30BQ3MIR4 351 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 MIC13Q5XKP0 118 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 GAGE2AQ6NT46 116 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 AMN1Q8IY45 258 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 LINC01006Q8NI28 216 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 TRGV9Q99603 122 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 KLK15Q9H2R5 256 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 PRNDQ9UKY0 176 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 EPDR1Q9UM22 224 aa3.88□□□□□ -1.79
CD44-218ENST00000525469 ZNF256Q9Y2P7 627 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms