RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RPS10P46783 165 aaKnown RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 IGLV3-21P80748 117 aaPredicted RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 SS18Q15532 418 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 C15orf32Q32M92 178 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 MIC13Q5XKP0 118 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 OR2T2Q6IF00 324 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 Q6ZQT7 251 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CLEC2BQ92478 149 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 AQP3Q92482 292 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 IMMP1LQ96LU5 166 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 TNFRSF19Q9NS68 423 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 TMEM106BQ9NUM4 274 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 CEP250Q9BV73 2442 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 GOLGA4Q13439 2230 aaKnown RBP2.93□□□□□ -1.94
CD44-213ENST00000525209 PI4KAP42356 2102 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 GTF3C1Q12789 2109 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 ABCA7Q8IZY2 2146 aa2.93□□□□□ -1.94
CD44-213ENST00000525209 SCN8AQ9UQD0 1980 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 NCOR2Q9Y618 2525 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 MYO15AQ9UKN7 3530 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 TCHHQ07283 1943 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 MUC21A0A0G2JKD1 596 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 A0A0J9YWU9 116 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 A6NN06 94 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 C17orf98A8MV24 154 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 CIRBPQ14011 172 aaKnown RBP2.92□□□□□ -1.94
CD44-213ENST00000525209 ASB16-AS1Q495Z4 193 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 FAM74A1Q5RGS3 127 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 Q5W150 140 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 Q6P435 159 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 FP248Q71RG6 208 aaPredicted RBP2.92□□□□□ -1.94
CD44-213ENST00000525209 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 RNF5Q99942 180 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 LINC00467Q9BRT7 94 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 DCHS1Q96JQ0 3298 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 FAM208BQ5VWN6 2430 aa2.92□□□□□ -1.94
CD44-213ENST00000525209 GVINP1Q7Z2Y8 2422 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 ZFC3H1O60293 1989 aaKnown RBP2.91□□□□□ -1.94
CD44-213ENST00000525209 TANC2Q9HCD6 1990 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 A0A096LNJ9 63 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 ZNF736B4DX44 427 aaPredicted RBP2.91□□□□□ -1.94
CD44-213ENST00000525209 G3V3Q6 166 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 H3BQ85 93 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 EDF1O60869 148 aaKnown RBP2.91□□□□□ -1.94
CD44-213ENST00000525209 MT-ATP8P03928 68 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 SHBGP04278 402 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 ETV6P41212 452 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 NPC2P61916 151 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 Q0VG73 95 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 FUT5Q11128 374 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 Q6ZS52 159 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 RETNLBQ9BQ08 111 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 NABP2Q9BQ15 211 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 ATG5Q9H1Y0 275 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 BET1LQ9NYM9 111 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 TPRKBQ9Y3C4 175 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 FRYLO94915 3013 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 EPG5Q9HCE0 2579 aa2.91□□□□□ -1.94
CD44-213ENST00000525209 CFAP47Q6ZTR5 3102 aa2.9□□□□□ -1.94
CD44-213ENST00000525209 COL1A2P08123 1366 aa2.9□□□□□ -1.94
CD44-213ENST00000525209 CHD8Q9HCK8 2581 aa2.9□□□□□ -1.94
CD44-213ENST00000525209 FAM24AA6NFZ4 105 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 LYRM1O43325 122 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 DNAH10OSP0CZ25 163 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 PEBP1P30086 187 aaKnown RBP2.9□□□□□ -1.95
CD44-213ENST00000525209 CKS2P33552 79 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 KRTAP10-11P60412 298 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 DEFB116Q30KQ4 102 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 ATP11AUNQ6ZP68 121 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 Q6ZR03 302 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 PSMF1Q92530 271 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 HYLS1Q96M11 299 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 NHP2Q9NX24 153 aaKnown RBP2.9□□□□□ -1.95
CD44-213ENST00000525209 EML5Q05BV3 1969 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 KIF26BQ2KJY2 2108 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 OTOGLQ3ZCN5 2332 aa2.9□□□□□ -1.95
CD44-213ENST00000525209 HELZP42694 1942 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 MYOFQ9NZM1 2061 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 ASCC3Q8N3C0 2202 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 CABIN1Q9Y6J0 2220 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 URB1O60287 2271 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 TRAV7A0A075B6U4 112 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 TRBV6-6A0A0A6YYG2 114 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 TMEM235A6NFC5 223 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 COLCA2A8K830 154 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 E7EQL1 145 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 PANO1I0J062 215 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 J3QKU1 62 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 GNRH2O43555 120 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 CPSF4O95639 269 aaKnown RBP2.89□□□□□ -1.95
CD44-213ENST00000525209 CLPSP04118 112 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 TRAPPC2P0DI81 140 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 TRAPPC2BP0DI82 140 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 ANK1P16157 1881 aa2.89□□□□□ -1.95
CD44-213ENST00000525209 FXYD2P54710 66 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms