RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 DIRC3C9JPN6 131 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 F2Z2F3 143 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 M0R143 59 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 SPINK4O60575 86 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 CTRLP40313 264 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 DEFB1P60022 68 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 MRPL54Q6P161 138 aaKnown RBP4.76□□□□□ -1.65
NUP98-213ENST00000524563 UBE2DNLQ8IWF7 75 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 ARL6IP6Q8N6S5 226 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 OR4B1Q8NGF8 309 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 TSKUQ8WUA8 353 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 NDFIP1Q9BT67 221 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 PGPEP1Q9NXJ5 209 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 NACAE9PAV3 2078 aa4.76□□□□□ -1.65
NUP98-213ENST00000524563 TRAV8-1A0A0A6YYK1 113 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 TRAV8-2A0A0B4J237 113 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 TRAV10A0A0B4J240 114 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 C19orf71A6NCJ1 209 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 FAM231BA6NCW3 169 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 KNCNA6PVL3 124 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 NPIPB6E9PJ23 425 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 M0R3E3 92 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 ZNF324O75467 553 aaPredicted RBP4.75□□□□□ -1.65
NUP98-213ENST00000524563 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 TCTAP57738 103 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
NUP98-213ENST00000524563 NIT1Q86X76 327 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 GATD1Q8NB37 220 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 OR2D3Q8NGH3 330 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 C20orf173Q96LM9 149 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 MIEN1Q9BRT3 115 aa4.75□□□□□ -1.65
NUP98-213ENST00000524563 IGKV2-40A0A087WW87 121 aaPredicted RBP4.74□□□□□ -1.65
NUP98-213ENST00000524563 IGHV4-28A0A0C4DH34 117 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 F6UB75 175 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 J3QL48 77 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 IGKV2D-40P01614 121 aaPredicted RBP4.74□□□□□ -1.65
NUP98-213ENST00000524563 APCSP02743 223 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 SNRPD3P62318 126 aaKnown RBP4.74□□□□□ -1.65
NUP98-213ENST00000524563 C21orf62-AS1Q17RA5 79 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 IGFL4Q6B9Z1 124 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 BAGE3Q86Y29 109 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 RNF182Q8N6D2 247 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 C18orf32Q8TCD1 76 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 C16orf92Q96LL3 132 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 GFRA4Q9GZZ7 299 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 CLEC5AQ9NY25 188 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
NUP98-213ENST00000524563 IGHV4-4A0A075B6R2 117 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 C20orf202A1L168 122 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 TMEM189A5PLL7 270 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 ZNF705FA8MVS1 300 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 IGLV2-11P01706 119 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 GIG44P09565 113 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 ZNF705DP0CH99 300 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 ZNF705BP0CI00 300 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 PRB4P10163 310 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 HLA-DRB4P13762 266 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 MIFP14174 115 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 HLA-DMBP28068 263 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 SRIP30626 198 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 ID1P41134 155 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 FOXA3P55318 350 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 HBBP68871 147 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 GAGE1Q13065 139 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 SLAQ13239 276 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 TDRG1Q3Y452 100 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 SAMD13Q5VXD3 122 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 MORN3Q6PF18 240 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 FOXI2Q6ZQN5 318 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 LINC00336Q6ZUF6 198 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 MRPL53Q96EL3 112 aaKnown RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 ZC2HC1AQ96GY0 325 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 PGLYRP4Q96LB8 373 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 C8orf49Q96NF6 230 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 ALKBH7Q9BT30 221 aaPredicted RBP4.73□□□□□ -1.65
NUP98-213ENST00000524563 VAMP8Q9BV40 100 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 SAMD10Q9BYL1 202 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 HLA-DRB4X5D2U9 266 aa4.73□□□□□ -1.65
NUP98-213ENST00000524563 VPS13DQ5THJ4 4388 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 A0A0J9YX75 114 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 RBAKDNA6NC62 111 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 H3BMM0 161 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 M0R2N4 97 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 TCAPO15273 167 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 CRXO43186 299 aaPredicted RBP4.72□□□□□ -1.65
NUP98-213ENST00000524563 IGKV3-20P01619 116 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 AMTP48728 403 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 CAMPP49913 170 aa4.72□□□□□ -1.65
NUP98-213ENST00000524563 RPS20P60866 119 aaKnown RBP4.72□□□□□ -1.65
NUP98-213ENST00000524563 RIGQ13278 110 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms