RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 BUB1B-PAK6H3BSN5 160 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 LECT2O14960 151 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 CYB5BO43169 146 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 SSSCA1O60232 199 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 S1PR2O95136 353 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 CRYZL1O95825 349 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 IFNA5P01569 189 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 IFNA17P01571 189 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 IGKV1-5P01602 117 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 TFF1P04155 84 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 SAA2P0DJI9 122 aaPredicted RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 CCL3L1P16619 93 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ZNF22P17026 224 aaPredicted RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 BRS3P32247 399 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 G6PCP35575 357 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 SNCAP37840 140 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 GNG10P50151 68 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 SULT1A1P50225 295 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 DLX6P56179 175 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 HSPE1P61604 102 aaKnown RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 POLR2GP62487 172 aaKnown RBP eCLIP1.8□□□□□ -2.12
SKP1-212ENST00000523966 ERHP84090 104 aaKnown RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 SERF2P84101 59 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 HLA-DRB5Q30154 266 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 VMA21Q3ZAQ7 101 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 RPL39P5Q59GN2 51 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ALKAL2Q6UX46 152 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 DPPA3Q6W0C5 159 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ZNF833PQ6ZTB9 187 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ZNF439Q8NDP4 499 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 LFNGQ8NES3 379 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 OR11H6Q8NGC7 330 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 OR10P1Q8NGE3 313 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 OR1L8Q8NGR8 309 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ZNF251Q9BRH9 671 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 GGACTQ9BVM4 153 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 PARD6GQ9BYG4 376 aaPredicted RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 COMMD5Q9GZQ3 224 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 TUBA4BQ9H853 241 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 TMEM14BQ9NUH8 114 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 MED9Q9NWA0 146 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 BET1LQ9NYM9 111 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 PSENENQ9NZ42 101 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 OR5AC2Q9NZP5 309 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 LINC00588Q9Y4M8 146 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
SKP1-212ENST00000523966 CENPEQ02224 2701 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 BSNQ9UPA5 3926 aa1.8□□□□□ -2.12
SKP1-212ENST00000523966 MYO9AB2RTY4 2548 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 POLQO75417 2590 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 FAM24AA6NFZ4 105 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 A8MWP6 167 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 B4DSR2 109 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 C8orf87E5RJ46 101 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 C17orf112F2Z3M2 114 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 LYNX1G3V0Z9 82 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 LY6LH3BQJ8 138 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 C19orf84I3L1E1 186 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 J3QKU1 62 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 CORTO00230 105 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 HMGB3O15347 200 aaKnown RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 CST7O76096 145 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 LY6HO94772 140 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 CFDP00746 253 aaPredicted RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 LTAP01374 205 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 IFNA10P01566 189 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 IGHV3-7P01780 117 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 PRH1P02810 166 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 PRB1P04280 392 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 IGKV1-16P04430 117 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 IFNA4P05014 189 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 NMBP08949 121 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 METTL15P1P0C7V9 234 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 SLC25A16P16260 332 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 ARF6P62330 175 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 RPL30P62888 115 aaKnown RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 PRCDQ00LT1 54 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 SPANXN5Q5MJ07 72 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 AKR1C8PQ5T2L2 129 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 RPL7L1Q6DKI1 246 aaKnown RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 TMEM14EPQ6UXP3 125 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 TEX29Q8N6K0 151 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 OR10D4PQ8NGN7 298 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 OR5C1Q8NGR4 320 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 OR2T10Q8NGZ9 312 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 CLDND2Q8NHS1 167 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 TMEM167AQ8TBQ9 72 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 C10orf105Q8TEF2 133 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 LEAP2Q969E1 77 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 MALSU1Q96EH3 234 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 SMIM12Q96EX1 92 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 NABP2Q9BQ15 211 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 GINS3Q9BRX5 216 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 PSMG3Q9BT73 122 aaPredicted RBP1.79□□□□□ -2.12
SKP1-212ENST00000523966 PBDC1Q9BVG4 233 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 TMEM147Q9BVK8 224 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 BPESC1Q9GZL8 116 aa1.79□□□□□ -2.12
SKP1-212ENST00000523966 SMDT1Q9H4I9 107 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms