RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 Q86TA4 180 aa11.84□□□□□ -0.51
CCNC-213ENST00000523541 TRBV6-4A0A1B0GX49 114 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 PFDN1O60925 122 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 NXPH4O95158 308 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
CCNC-213ENST00000523541 TIRAPP58753 221 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
CCNC-213ENST00000523541 TMUB2Q71RG4 321 aa11.83□□□□□ -0.52
CCNC-213ENST00000523541 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 H2AFB1P0C5Y9 115 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
CCNC-213ENST00000523541 RAB5CP51148 216 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 FAM162BQ5T6X4 162 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 FAM213BQ8TBF2 198 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 IL36BQ9NZH7 164 aa11.82□□□□□ -0.52
CCNC-213ENST00000523541 KIAA1109Q2LD37 5005 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 A8MWV9 139 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 LTAP01374 205 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 ASIPP42127 132 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 TCTE3Q8IZS6 198 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
CCNC-213ENST00000523541 PGPEP1LA6NFU8 196 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 B4DEV8 164 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 PAGE4O60829 102 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 MGST1P10620 155 aaKnown RBP11.8□□□□□ -0.52
CCNC-213ENST00000523541 RHOHQ15669 191 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 ZNF674Q2M3X9 581 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 ZNF506Q5JVG8 444 aa11.8□□□□□ -0.52
CCNC-213ENST00000523541 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 KRBOX1C9JBD0 128 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 CRIP1P50238 77 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 SLC25A29Q8N8R3 303 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 ZC2HC1AQ96GY0 325 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 LY96Q9Y6Y9 160 aa11.79□□□□□ -0.52
CCNC-213ENST00000523541 TEX46H3BTG2 121 aa11.78□□□□□ -0.52
CCNC-213ENST00000523541 EVI2AP22794 236 aa11.78□□□□□ -0.52
CCNC-213ENST00000523541 AKR1C3P42330 323 aa11.78□□□□□ -0.52
CCNC-213ENST00000523541 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
CCNC-213ENST00000523541 SH2D1AO60880 128 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 DNAH10OSP0CZ25 163 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 LINC00315P59091 139 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 SPATA12Q7Z6I5 190 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 NHLRC2Q8NBF2 726 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 MANBALQ9NQG1 85 aa11.77□□□□□ -0.53
CCNC-213ENST00000523541 C10orf126Q8N4M7 172 aa11.76□□□□□ -0.53
CCNC-213ENST00000523541 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
CCNC-213ENST00000523541 Q6ZNX1 250 aa11.75□□□□□ -0.53
CCNC-213ENST00000523541 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
CCNC-213ENST00000523541 PARLQ9H300 379 aa11.75□□□□□ -0.53
CCNC-213ENST00000523541 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
CCNC-213ENST00000523541 RHODO00212 210 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 C1QBP02746 253 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 CXCL1P09341 107 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 SLC51BQ86UW2 128 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 BAGE2Q86Y30 109 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 PHLDA3Q9Y5J5 127 aa11.74□□□□□ -0.53
CCNC-213ENST00000523541 TRAV8-6A0A0B4J262 113 aa11.73□□□□□ -0.53
CCNC-213ENST00000523541 LOC100131303A0A0U1RQF7 123 aa11.73□□□□□ -0.53
CCNC-213ENST00000523541 EREGO14944 169 aa11.73□□□□□ -0.53
CCNC-213ENST00000523541 SULT1A2P50226 295 aa11.73□□□□□ -0.53
CCNC-213ENST00000523541 DMRTA1Q5VZB9 504 aa11.73□□□□□ -0.53
CCNC-213ENST00000523541 Q6ZRN7 208 aaPredicted RBP11.73□□□□□ -0.53
CCNC-213ENST00000523541 IGHV3-73A0A0B4J1V6 119 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 IGHV3-38A0A0C4DH36 116 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 H3BVH4 76 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 M0R036 132 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 WFDC10BQ8IUB3 73 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
CCNC-213ENST00000523541 A0A1B0GV50 99 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 LINC01556Q5JQF7 62 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 LELP1Q5T871 98 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 ZFP82Q8N141 532 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 ATP6V0E2Q8NHE4 81 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 SFRP2Q96HF1 295 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
CCNC-213ENST00000523541 GRIFINA4D1Z8 144 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 GNG13Q9P2W3 67 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 LRP1BQ9NZR2 4599 aa11.7□□□□□ -0.54
CCNC-213ENST00000523541 A0A087WWC5 75 aa11.69□□□□□ -0.54
CCNC-213ENST00000523541 CRYGDP07320 174 aa11.69□□□□□ -0.54
CCNC-213ENST00000523541 TAGLN2P37802 199 aaKnown RBP11.69□□□□□ -0.54
CCNC-213ENST00000523541 CCL20P78556 96 aa11.69□□□□□ -0.54
CCNC-213ENST00000523541 PGPEP1Q9NXJ5 209 aa11.69□□□□□ -0.54
CCNC-213ENST00000523541 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
CCNC-213ENST00000523541 PDE6DO43924 150 aa11.68□□□□□ -0.54
CCNC-213ENST00000523541 IFNA1P01562 189 aa11.68□□□□□ -0.54
CCNC-213ENST00000523541 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms